Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma06g00276 ATGGGAACCCTTGGGAGAGCGATCTACAGCGTTGGTAACTGGATTCGAGGGACTGGACAGGCCATTGATCGTCTCGGTTCCCTCCTCCAGGGCGGTTACTACGTCCAAGAGCAGCTGTCTAGGCATCGAACTCTGATGGACATATTTGATAAGGCTCCTGTTGTTGATGAGGATGTATTTGTTGCGCCTAGTGCCTCCGTCATTGGAGACGTTCAACTTGGAAGAGGATCATCCATTTGGTATGGAGTTGTCTTGAGGGGTGATGTTAACAGCATCAGAGTTGGAACTGGAACTAACATACAGGACAACTCTCTGGTGCATGTTGCAAAGTCAAATTTAAGTGGGAAGGTGTTGCCTACAATTATTGGGAATAATGTTACTGTCGGCCACAGTGCTGTTATCCATGGTTGTACTGTTGAGGATGAGGCTTTTGTTGGTATGGGTGCAATACTACTTGATGGTGTAGTTGTTGAGAAAAATGCCATGGTTGCTGCTGGAGCCCTTGTCAGACAGAATACAAGGATTCCTTCTGGGGAGGTATGGGCAGGCAATCCCGCAAAGTTCCTGAGAAAGCTCACTGATGAAGAGATAGCTTTCATCTCCCAGTCAGCCACCAATTATACTAACCTTGCACAAGTCCATGCATCTGAAAATTCAAAGTCTTATGATGAAATTGAGTTTGAGAAGGTGCTGCGAAAAAAGTATGCACGTAAAGATGAGGAGTATGACTCTATGCTGGGTGTTGTTCGTGAGATCCCACCGGAGCTTATTCTTCCTGATAATGTCTTACCTGATAAAGCAGAAAAAGCTCTTAAAAAATGA 822 0.4526 MGTLGRAIYSVGNWIRGTGQAIDRLGSLLQGGYYVQEQLSRHRTLMDIFDKAPVVDEDVFVAPSASVIGDVQLGRGSSIWYGVVLRGDVNSIRVGTGTNIQDNSLVHVAKSNLSGKVLPTIIGNNVTVGHSAVIHGCTVEDEAFVGMGAILLDGVVVEKNAMVAAGALVRQNTRIPSGEVWAGNPAKFLRKLTDEEIAFISQSATNYTNLAQVHASENSKSYDEIEFEKVLRKKYARKDEEYDSMLGVVREIPPELILPDNVLPDKAEKALKK 273
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma06g00276 273 Pfam Hexapeptide repeat of succinyl-transferase 119 151 IPR001451 -
Gma06g00276 273 PANTHER DYNACTIN SUBUNIT P25 1 271 - -
Gma06g00276 273 CDD LbH_gamma_CA_like 54 212 - -
Gma06g00276 273 Gene3D Hexapeptide repeat proteins 43 223 - -
Gma06g00276 273 PANTHER GAMMA CARBONIC ANHYDRASE 1, MITOCHONDRIAL 1 271 - -
Gma06g00276 273 SUPERFAMILY Trimeric LpxA-like enzymes 48 213 IPR011004 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma06g00276 Gma-Chr6 2451716 2454959 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma06g00276 121 196 Miscellaneous Gene Families AT2G17640 32.941 5.15e-06 45.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma06g00276 K01726 - gmx:100805278 538.11
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma04g00291 04 2528998 2532802 Gma06g00276 06 2451716 2454959 GST