Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma06g00266 ATGATACTGCAGTTCTTCGTGCTTTCACAGAGAGGCGATAACATCGTCTACCGCGACTCTCAAAAGGGAAGCGCTGAGACATTTTTCCGAAAAGTCAAGTTCTGGAAAGAGAATGCTGAGGGAGATGCTCCACCTGTTTTTAATATAGATGGTGTGAACTACTTCCACGTGAAGGCTGCTGGATTGCTATTTGTTGCTACTACTAGAGTCAATGTCTCCCCTTCTCTTGTTTTGGAACTCTTACAAAGAATTGCACGTGTCATCAAAGATTACCTTGGTGTTCTCAATGAAGATTCCTTTAGAAAGAACTTCGTGCTCGTTTATGAATTGCTGGATGAAGTCATAGATTTTGGTTATGTGCAAACAACATCCACTGAGGTTTTGAAGTCATATGTTTTCAATGAGCCAATTGTGATTGATGCTGCACGGATGCCTCCACTTGGCCCTGCTTCCATTTTTATGCAAGGGACCAAACGAATGCCAGGTACAGCTATTACAAAGTCTGTGGTTACTAATGAACCTGGTGGAAGGAAGAGGGATGAGATCTTTGTTGATGTAATTGAGAAAATAAGTGTTACATTCAACTCTAGTGGATATATACTTACTAGTGAGATAGATGGAACCATTCAAATGAAGAGTTATCTTACTGGTAACCCGGAGATTCGACTTGCTCTCAATGAGGACCTGAGTATAGGAACAAGTGATTATAGAGGTTCAGGTGCTGTCATTTTAGATGATTGTAACTTCCATGAGTCTGTACACCTTGATAGTTTTGATGTTGATAGAACTTTGTCATTGGTACAACCAGAAGGTGAATTTCCAGTCATGAATTATCATATGACTCAACCATTTAAGCCACCCTTTCGTATTAATGCATTGATTGAAGAAACAGGATCCCTAAATGCTGAAGTGACCATTAAAGTGCGAGCTGAATTCAACTCAAGTATCAATGCTAACACTGTTCTTGTAGAGATGCCTCTGCCATCATTTACAGCTCGGTATGTTAATTTTGAGTTAGAACCTGGAGCAGTTGGACACACCACTGATTTTAAGGAAGCAAATAAAAGACTGGAATGGGGCCTGAAAAAGGTTGGTGGTGGATCTGAACATACTTTACGAGCAAAGCTAACGTTTTCACGGAGTTACATGGAAATATCATGA 1161 0.4022 MILQFFVLSQRGDNIVYRDSQKGSAETFFRKVKFWKENAEGDAPPVFNIDGVNYFHVKAAGLLFVATTRVNVSPSLVLELLQRIARVIKDYLGVLNEDSFRKNFVLVYELLDEVIDFGYVQTTSTEVLKSYVFNEPIVIDAARMPPLGPASIFMQGTKRMPGTAITKSVVTNEPGGRKRDEIFVDVIEKISVTFNSSGYILTSEIDGTIQMKSYLTGNPEIRLALNEDLSIGTSDYRGSGAVILDDCNFHESVHLDSFDVDRTLSLVQPEGEFPVMNYHMTQPFKPPFRINALIEETGSLNAEVTIKVRAEFNSSINANTVLVEMPLPSFTARYVNFELEPGAVGHTTDFKEANKRLEWGLKKVGGGSEHTLRAKLTFSRSYMEIS 386
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma06g00266 386 Gene3D Mu homology domain, subdomain B 178 285 - -
Gma06g00266 386 Pfam Adaptor complexes medium subunit family 178 379 IPR028565 -
Gma06g00266 386 PIRSF AP_complex_mu 1 386 IPR001392 GO:0006886|GO:0016192|GO:0030131
Gma06g00266 386 PRINTS Clathrin coat assembly protein signature 244 271 IPR001392 GO:0006886|GO:0016192|GO:0030131
Gma06g00266 386 PRINTS Clathrin coat assembly protein signature 358 369 IPR001392 GO:0006886|GO:0016192|GO:0030131
Gma06g00266 386 PRINTS Clathrin coat assembly protein signature 97 124 IPR001392 GO:0006886|GO:0016192|GO:0030131
Gma06g00266 386 PANTHER AP-4 COMPLEX SUBUNIT MU-LIKE 2 381 - -
Gma06g00266 386 SUPERFAMILY Second domain of Mu2 adaptin subunit (ap50) of ap2 adaptor 178 380 IPR036168 -
Gma06g00266 386 Gene3D Mu homology domain, subdomain B 286 385 - -
Gma06g00266 386 PANTHER AP COMPLEX SUBUNIT MU 2 381 - -
Gma06g00266 386 CDD AP4_Mu_N 4 139 - -
Gma06g00266 386 ProSiteProfiles Mu homology domain (MHD) profile. 179 386 IPR028565 -
Gma06g00266 386 Gene3D - 1 137 - -
Gma06g00266 386 SUPERFAMILY SNARE-like 1 137 IPR011012 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma06g00266 Gma-Chr6 2365148 2369445 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma06g00266 K12402 - gmx:100800985 712.22
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma06g00266 06 2365148 2369445 Gma06g00266 06 2365148 2369445 ECH