Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma06g00178 ATGGCCACCGTCACTTCTGCAGCAGTTTCTATTCCCTCATTCACTGGCCTCAAGGCAAGCGCAGGCAAAGTGAGTGCCGCCGCAGTTAAAGTCTCAGCTCCCCAAGCCACAAGGTTCTGCGGCATCAAGGCTTCCCTCAAAGACGTTGGAGTCGCTGTTGTGGCCACTGCTGCGAGCGCAGTTCTAGCTAGCAACGCCATGGCCATTGAAGTGTTACTGGGCACTGATGACGGGTCTCTGGTTTTCTCTCCCAACTCTTTCTCCGTGGCCCCTGGGGAAAAGATCGTGTTCAAGAACAACGCAGGTTTCCCCCACAACGTTGTGTTCGACGAGGACGAGATTCCTAGCGGCGTGGATGCAGGGAAAATCTCCATGAGCGAAGAAGACCTTCTCAATGCGGCTGGTGAGACTTACAGCGTTACTTTGGATGCCAAGGGAACCTACAGTTTCTACTGTTCGCCTCACCAAGGAGCTGGGCCTATGGGATGA 489 0.544 MATVTSAAVSIPSFTGLKASAGKVSAAAVKVSAPQATRFCGIKASLKDVGVAVVATAASAVLASNAMAIEVLLGTDDGSLVFSPNSFSVAPGEKIVFKNNAGFPHNVVFDEDEIPSGVDAGKISMSEEDLLNAAGETYSVTLDAKGTYSFYCSPHQGAGPMG 162
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma06g00178 162 Pfam Copper binding proteins, plastocyanin/azurin family 70 159 IPR000923 GO:0005507|GO:0009055
Gma06g00178 162 SUPERFAMILY Cupredoxins 66 159 IPR008972 -
Gma06g00178 162 CDD Plastocyanin 69 162 IPR002387 GO:0005507|GO:0009055
Gma06g00178 162 PANTHER PLASTOCYANIN MAJOR ISOFORM, CHLOROPLASTIC-RELATED 1 162 - -
Gma06g00178 162 TIGRFAM cyanin_plasto: plastocyanin 69 162 IPR002387 GO:0005507|GO:0009055
Gma06g00178 162 Gene3D - 69 162 IPR008972 -
Gma06g00178 162 PRINTS Type I copper blue protein family signature 88 101 IPR001235 GO:0005507|GO:0009055
Gma06g00178 162 PRINTS Type I copper blue protein family signature 103 118 IPR001235 GO:0005507|GO:0009055
Gma06g00178 162 PRINTS Type I copper blue protein family signature 144 158 IPR001235 GO:0005507|GO:0009055
Gma06g00178 162 PRINTS Plastocyanin signature 146 162 IPR002387 GO:0005507|GO:0009055
Gma06g00178 162 PRINTS Plastocyanin signature 74 93 IPR002387 GO:0005507|GO:0009055
Gma06g00178 162 PRINTS Plastocyanin signature 97 115 IPR002387 GO:0005507|GO:0009055
Gma06g00178 162 PANTHER PLASTOCYANIN 1 162 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma06g00178 Gma-Chr6 1569749 1570341 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma06g00178 K02638 - gmx:100499708 269.626
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma06g00178 06 1569749 1570341 Gma06g00178 06 1569749 1570341 ECH
Gma04g00190 04 1630359 1631505 Gma06g00178 06 1569749 1570341 GST