Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma06g00147 ATGGGCGAGGTATCTGAAAGTACCACGACGAAGAGGAAGAAGAAGGGACGCCCCTCTCTTTTGGATCTTCAAAAGCGATCTCTCAAAAAAGAACAGCAAAATCACCACCAGCAGCGACAAAGCAACAACTCCAATTCAGCCAATTCCCACAACAACAAGAACAAGACCAACAAAAACGCTGTTCCCCACGACGACGACGAGGACGAACGCAAGGAGAAGAAACACAAGCTCCTGGTCGGTCTCAATTCCCATCTCCAGAACCCAACATTATTTCCCAATTCCCAACCCTTCAATTCCGATCCCAACAAGAGGCGCAAGACTATTGACCCTCTCCAAACGGATTGGAAGGTTCCGAAAGCGACTGACAGTAAACATGGTTCGCAGGGAGAGTCCGGTCCCACTACGCCTTTGCCAGACAAAAAGCTCTTGCTGTTTATCCTTGACAGGCTTCAAAAaaaggacacacatggggtgttctctgagcctgtggatccagaagagcttcctgattatcatgacatcattaaacacccgatggattttggaactgtgaggaagaaattggatgatgggctatataccgacttggaacattttgagatagatgtgttcttgatatgctctaatgcaatgcaatataattcctcagataccatttaccatcgacagGCCCGAGCCATGCAAGAGATTGCAAGGAAGGACTTTGAGAATCTGAGACAAGATAGTGATGATGATAGTGAACCACAGCCCAAAATTGTGCAGAAAGGAAGGCCACCAGGCAAGCACTCAAGAAAGTCACTGGGACTTGGTATGCCTCCTTCTGAGCGTGTTGGTCCTGAATCTTCTTCTGATGCAACTCTGGCTTCTGGTGCGGATATTGGTAGTGGCTCCAACGGTTATAATCTAAGAAAAGTACCCAGCAAATTTCAGCCCACAGATTCATCTGCCAGGGCCTACAACAGCACTTTTAACAGTGGAGGGTATACTGGCTGTTCTGATTGGGAGAATGAATTTCCAGCTTCTGTTGTTAAAGCTGTGCTAAGATATGGAAAGAAGCAGTTTGCAGTTGATGAGACCAGGCGTGATACTTACAAAAATCCAGTGACTTTAGGAAATGAACGACCGATGTTGTCCACAGTTGAAGATGAATTCAAGCAACTTCTTGCTGTAGGAGTACACATGAAGCATAGctatgcaagaagtctagcccattttgctgcaaaccttggtcctgttgtttggaagattgctgcaagtaaaatcagaggtgtgttgccagctggacatgaatttggtcctggatgggtAAGTGAAGACGACGGGTCATCACAGAGGCAACACTTCCCAGTTCGTGATGAGGGTAGAACTTCAGACCATCCTGTACCAGAGGATTATAGAAGTAGATTTTCTTCTCCATCTGGATCGTTTCCCCTTGCAAATAGATCAGGCTTGCAAAGTGGAGACATGGCTATAAATAATTACCAAAATGACTTGAATCCAGTAATCAACATACCTGGTGGGTCTGAATCCATAACTCCTATGAGGATTCAGCAGGAATCCATGGTGCACTCTGATGATTTTGGTTCACATGATCGGTTAGGTTCTAATTTTCCATCCCAAATGAAGATGGTAAGACTTGCTGATCTAACTGGGTCTTCGAGTGCTGGGGTTGCTCCTCAAATGTTTGACATGGATCCCCCCATAAGCAACCACATTGCACATACAAATGTTTGTCCTTCTCTTAAGGGTCAGTACTTAAGCAAATCAAGTCAATTAGATTCCGGTAATTTATTGGCACGGGAACCTGGATTTGAGCAACGAAGTTGGTCTCAAGGGCTTGCTGGAAAATCATCTTGGCAGGGATCGGAAGTTCCCACTAAACAAAATTCTTTTGCACTTGCTAATGACATAAATGGAGAGATTGGAACTACAAATTCATCTAATTCCAACGTAGAGGCTGGTTCTCAGTTGCAGCCCAATTTGGCATTACAGCTCTGA 1998 0.3764 MGEVSESTTTKRKKKGRPSLLDLQKRSLKKEQQNHHQQRQSNNSNSANSHNNKNKTNKNAVPHDDDEDERKEKKHKLLVGLNSHLQNPTLFPNSQPFNSDPNKRRKTIDPLQTDWKVPKATDSKHGSQGESGPTTPLPDKKLLLFILDRLQKKDTHGVFSEPVDPEELPDYHDIIKHPMDFGTVRKKLDDGLYTDLEHFEIDVFLICSNAMQYNSSDTIYHRQARAMQEIARKDFENLRQDSDDDSEPQPKIVQKGRPPGKHSRKSLGLGMPPSERVGPESSSDATLASGADIGSGSNGYNLRKVPSKFQPTDSSARAYNSTFNSGGYTGCSDWENEFPASVVKAVLRYGKKQFAVDETRRDTYKNPVTLGNERPMLSTVEDEFKQLLAVGVHMKHSYARSLAHFAANLGPVVWKIAASKIRGVLPAGHEFGPGWVSEDDGSSQRQHFPVRDEGRTSDHPVPEDYRSRFSSPSGSFPLANRSGLQSGDMAINNYQNDLNPVINIPGGSESITPMRIQQESMVHSDDFGSHDRLGSNFPSQMKMVRLADLTGSSSAGVAPQMFDMDPPISNHIAHTNVCPSLKGQYLSKSSQLDSGNLLAREPGFEQRSWSQGLAGKSSWQGSEVPTKQNSFALANDINGEIGTTNSSNSNVEAGSQLQPNLALQL 665
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma06g00147 665 ProSitePatterns Bromodomain signature. 156 213 IPR018359 -
Gma06g00147 665 SMART bromo_6 132 240 IPR001487 GO:0005515
Gma06g00147 665 MobiDBLite consensus disorder prediction 37 56 - -
Gma06g00147 665 MobiDBLite consensus disorder prediction 435 477 - -
Gma06g00147 665 ProSiteProfiles Bromodomain profile. 151 221 IPR001487 GO:0005515
Gma06g00147 665 SUPERFAMILY Bromodomain 120 243 IPR036427 GO:0005515
Gma06g00147 665 MobiDBLite consensus disorder prediction 57 79 - -
Gma06g00147 665 PRINTS Bromodomain signature 154 167 IPR001487 GO:0005515
Gma06g00147 665 PRINTS Bromodomain signature 168 184 IPR001487 GO:0005515
Gma06g00147 665 PRINTS Bromodomain signature 184 202 IPR001487 GO:0005515
Gma06g00147 665 PRINTS Bromodomain signature 202 221 IPR001487 GO:0005515
Gma06g00147 665 MobiDBLite consensus disorder prediction 444 465 - -
Gma06g00147 665 MobiDBLite consensus disorder prediction 1 137 - -
Gma06g00147 665 CDD Bromodomain 139 235 - -
Gma06g00147 665 MobiDBLite consensus disorder prediction 1 36 - -
Gma06g00147 665 Pfam Bromodomain 146 225 IPR001487 GO:0005515
Gma06g00147 665 PANTHER BROMODOMAIN CONTAINING PROTEIN 8 492 - -
Gma06g00147 665 MobiDBLite consensus disorder prediction 239 314 - -
Gma06g00147 665 MobiDBLite consensus disorder prediction 102 123 - -
Gma06g00147 665 MobiDBLite consensus disorder prediction 279 314 - -
Gma06g00147 665 PANTHER BROMODOMAIN-CONTAINING PROTEIN-RELATED 8 492 - -
Gma06g00147 665 Gene3D - 137 255 IPR036427 GO:0005515
Gma06g00147 665 MobiDBLite consensus disorder prediction 82 101 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma06g00147 Gma-Chr6 1292241 1296748 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma06g00147 K22184 - gmx:100783010 1281.54
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma06g00147 06 1292241 1296748 Gma06g00147 06 1292241 1296748 ECH