Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma06g00143 ATGGATCAGTTCGAATCGTTTTTCAGGAGAGCAGATTTGGACGGAGATGGCAGAATCAGTGGAGCCGAAGCTGTCTCTTTCTTTCAGGGATCCAATTTGCCCAAACAAGTCCTCGCTCAGGTGTGGGCGTATGCTGATCAGGCCAAAACGGGATTCCTTGGCCGCGCAGAGTTTTTTAATGCTCTGAGGTTAGTCACTGTGGCTCAGAGTAAGCGAGATTTAACGCCTGATATTGTGAAGGCAGCGTTGTATGGTCCTGCTGCTGCTAAAATCCCTGCGCCACAGATTAATCTTGCTGCCGTGCCTCAACAACGTCCAAATTCGATGCCTGGTGCTGGGTCTGTCGGGCAGATGGGTGTTACCGCACCCAATTTGGCTCAAAGTTTTCCCTATAGAGGACAAGGGTTGGCAGGTCCTGGTGCAAACCCGCAATATTATCCTTCGCAGCAGAATCCTGGCATGAGACCTCCTCAATCCATGCCTGCTGGTGGCGGTCTGCATCCACAACAGGGTGTTGCAGGTCCAGATATTTCTAGAGGAGTTAACATGGGTGGTCACAGTTTCTCAAATCCTGGCGTCTCAAATGATTGGAATAATGTAAGGCCCGGTATGGTTGCTACCAGACCTGCAGGAATGATCCCGTCAGCTGCCTTACCGTCGTCCAcatctccagtttcaccaatgccccagtcatctccaatctcaccaatgccccagtcaACAACTGTTAACACTAAAGCATTAGGTGTTTCTGGAAATGGGTTCTCCTCCAATTCAGTTTTGGGCAATGATTTTTTCTCTGATGCCTCATCGACACAGAAACAAGAACCTGCTGGACAGAGTTATTCTGTCAGCAATGTCTCATCAGCCATTGTTCCTGTTTCCACTGCTTCCCAACCTGCAAGTAAACAAAATTCACTTGACTCATTGCAGGGTGCATATTCTTCAATGCTGCCTGCAAATAGTCAGTTTCAGCGGCCACAGTCTGCACCAATCACAACCCAGCAAATTTCACCACCAGCTTCTTCTTCACCACATACACCATCTGGGATGACAGCTGGGCTTGGAAATGCAAATTCTGACAATTCACAGCTTTCTTGGCCAAAAATGAAACCTACTGATGTGCAGAAGTATACAAAGGTGTTTATGGAAGTTGACACTGACAGGGATGGGAAAATCACTGGGGAGCAGGCACGCAGTCTATTTTTAAGCTGGAGATTACCCATAGATGTCTTAAAGAAGGTGTGGGACTTGTCTGATCAGGACAATGATAGCATGCTTTCATTGAAGGAGTTTTGCTTTGCTCTTTATTTGATGGAACGTTACAGGGAAGGTCGGCCTCTTCCACAGTCTCTTCCAAGCAATGTTATGTTTGACGAGACACTGATGTCAATGACAGGCCAACCAAAAAGTGCTTATGGAAATGCAGCCTGGGGTATTGGCCAAGGTTTTCGGCAGCAACAAGGTATTCCAGGTGCTCGGCCAGTGGCACCAACAGCTGGTTTGAGGCCATCAGTGCATGGAAGTTTTGCCCGGGCTGATGGCACTCAACAGCCCAATCAGCAAAAGTCAGGAACACCTGTGTTGGAGGATTCCTTTTTGAATGGTGAGCAGAATATATTGAATTCAAAGCCTCAAGAGGCAGCAACTGCAGAGAAAAAGTTTGAAGAAACTCAGAATGTGATTTTGGATTCAAAAGAGAAGATTGAGTTATACCGCAACAAAATGCAGGAACTGGTTCTATATAGAAGCAGATGTGATAATCGACTAAATGAGATTACAGAAAGGGCGTCTGCGGATAAGCGTGAGGCAGAATCATTGGGCAAGAAATATGAAGAGAAATACAAACAAGTAGCAGAAATAGTATCAAAATTGACTGTTGAAGAAGCTAAATTTCGTGATATACAGGATAGGAAGGTGGAGTTGCAGCAAGCAATTGTCAAAATGGTACAAGGAGGCAGTGCAGATGGTATCCTTCAGGTCCGTGCTGAACGCATACAGTCGGATCTTGAGGAGTTATTTAAGGCTCTGGCTGAACGGTGCAAGAAACATGGGATAGATGTGAAGTCAATTACAATGGTTCAGCTTCCTGCTGGTTGGCAACCTGGAATTCCAGAGGGAGCAGCTCTTTGGGATGAAGAGTGGGATAAATTTGAGGATGAAGGATTTGCTAATGATCTCACTTTTGCATCTTCAAAACCGAATCCTGCATTTATTGATGGAGAACAAAATTTATCTGATGATAATTCTGTTCATGGTTCACCTGTGAATGCAAATGGGAAGCAAGAAAATTCTGCTAATGGTGATTATACAGTTGAGGATGAATCCTATGCACACAGTGAAGATGACTTGGCAAGAAGCCCCCATAGTCTAGCTGGGAGGAGTACGTTGGGTAGTCCTTCTCGAGACTTTTCAAATGCTCATTTTGGAAAAAGTTTCGAAGCAGATGCAGAAACACACAGCAGAAGTTTTGATGAATCAACCTGGGGTGCATTTGACAACAACGAAGATGTGGACTCAGTGTGGGGTTTTAACACTAAGACCAAGGACTCTGACTTCGAGCAGGGAGATTTCTTTAAATCCGACGATTTTGGTATAAACCCAGTTAGAACAGGATCTACACATACAGATGGCACGTTCCAGTCAAAAAGCCCatttgcttttgatgattcagtgcctgcaactccagtttccaaatttgcttttgatgattcagtgcctgcaactccagtttccaaGTTCGGAAACTCTCCAAGGTACAGTGAGGCAGGGGATCACTTCTTTGACATGTCAAGGTTTGATTCCTTCAGGCACGAAAGTGGATATTCTCCACAACCAGAGAGGCTCACGAGAtttgattccataagtagtagcagcaaggattttggttacaataatgataaattcacaaggtttgactccataagtagcagcaaggattttggctacaatcctgagacgctcacaaggtttgattccatgagtagcagcaCTGATTTGGGCTTCGGTCGACAGGGACATGCAAGGTTTGACTCAATTAGTAGCACCAAGGACTTCGGTCACAGTGGTCCGTTCTCTTTTGATGACTCTGATCCATTCGGCTCCTCTGGCCCTTTTAAGCTAGAAGAAAAGCTGGACGGTAATATATGGTGTGGCCAATGTATCAGTTTGAAGAGAGCTTTTTCTATTTTTTTGGGTAAAATCCCGGTCTTGGTTGCTGCGCTAAGCATTTGGTGTTGTTGGATACGTTTAGATAGTTTTTTTTTTCTTCTGGCTGAGGTCCCTCTCGCTGCTTCTTTGAATTCCGACACAGATTAG 3318 0.4153 MDQFESFFRRADLDGDGRISGAEAVSFFQGSNLPKQVLAQVWAYADQAKTGFLGRAEFFNALRLVTVAQSKRDLTPDIVKAALYGPAAAKIPAPQINLAAVPQQRPNSMPGAGSVGQMGVTAPNLAQSFPYRGQGLAGPGANPQYYPSQQNPGMRPPQSMPAGGGLHPQQGVAGPDISRGVNMGGHSFSNPGVSNDWNNVRPGMVATRPAGMIPSAALPSSTSPVSPMPQSSPISPMPQSTTVNTKALGVSGNGFSSNSVLGNDFFSDASSTQKQEPAGQSYSVSNVSSAIVPVSTASQPASKQNSLDSLQGAYSSMLPANSQFQRPQSAPITTQQISPPASSSPHTPSGMTAGLGNANSDNSQLSWPKMKPTDVQKYTKVFMEVDTDRDGKITGEQARSLFLSWRLPIDVLKKVWDLSDQDNDSMLSLKEFCFALYLMERYREGRPLPQSLPSNVMFDETLMSMTGQPKSAYGNAAWGIGQGFRQQQGIPGARPVAPTAGLRPSVHGSFARADGTQQPNQQKSGTPVLEDSFLNGEQNILNSKPQEAATAEKKFEETQNVILDSKEKIELYRNKMQELVLYRSRCDNRLNEITERASADKREAESLGKKYEEKYKQVAEIVSKLTVEEAKFRDIQDRKVELQQAIVKMVQGGSADGILQVRAERIQSDLEELFKALAERCKKHGIDVKSITMVQLPAGWQPGIPEGAALWDEEWDKFEDEGFANDLTFASSKPNPAFIDGEQNLSDDNSVHGSPVNANGKQENSANGDYTVEDESYAHSEDDLARSPHSLAGRSTLGSPSRDFSNAHFGKSFEADAETHSRSFDESTWGAFDNNEDVDSVWGFNTKTKDSDFEQGDFFKSDDFGINPVRTGSTHTDGTFQSKSPFAFDDSVPATPVSKFAFDDSVPATPVSKFGNSPRYSEAGDHFFDMSRFDSFRHESGYSPQPERLTRFDSISSSSKDFGYNNDKFTRFDSISSSKDFGYNPETLTRFDSMSSSTDLGFGRQGHARFDSISSTKDFGHSGPFSFDDSDPFGSSGPFKLEEKLDGNIWCGQCISLKRAFSIFLGKIPVLVAALSIWCCWIRLDSFFFLLAEVPLAASLNSDTD 1105
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma06g00143 1105 PANTHER CALCIUM-BINDING EF HAND FAMILY PROTEIN 898 984 - -
Gma06g00143 1105 Gene3D - 1 90 - -
Gma06g00143 1105 MobiDBLite consensus disorder prediction 323 370 - -
Gma06g00143 1105 ProSiteProfiles EF-hand calcium-binding domain profile. 407 442 IPR002048 GO:0005509
Gma06g00143 1105 PANTHER CALCIUM-BINDING EF HAND FAMILY PROTEIN 988 1043 - -
Gma06g00143 1105 CDD EH 378 444 IPR000261 GO:0005515
Gma06g00143 1105 PANTHER EH DOMAIN 898 984 - -
Gma06g00143 1105 SMART eh_3 2 88 IPR000261 GO:0005515
Gma06g00143 1105 SMART eh_3 367 462 IPR000261 GO:0005515
Gma06g00143 1105 Pfam EF hand 5 21 IPR002048 GO:0005509
Gma06g00143 1105 SMART efh_1 3 31 IPR002048 GO:0005509
Gma06g00143 1105 SMART efh_1 411 439 IPR002048 GO:0005509
Gma06g00143 1105 SMART efh_1 377 405 IPR002048 GO:0005509
Gma06g00143 1105 SMART efh_1 37 65 IPR002048 GO:0005509
Gma06g00143 1105 PANTHER CALCIUM-BINDING EF HAND FAMILY PROTEIN 1 900 - -
Gma06g00143 1105 MobiDBLite consensus disorder prediction 774 788 - -
Gma06g00143 1105 PANTHER EH DOMAIN 1 900 - -
Gma06g00143 1105 PANTHER EH DOMAIN 988 1043 - -
Gma06g00143 1105 SUPERFAMILY EF-hand 363 457 IPR011992 -
Gma06g00143 1105 Gene3D - 368 457 - -
Gma06g00143 1105 MobiDBLite consensus disorder prediction 734 771 - -
Gma06g00143 1105 MobiDBLite consensus disorder prediction 734 801 - -
Gma06g00143 1105 CDD EH 4 70 IPR000261 GO:0005515
Gma06g00143 1105 MobiDBLite consensus disorder prediction 235 249 - -
Gma06g00143 1105 MobiDBLite consensus disorder prediction 130 195 - -
Gma06g00143 1105 ProSiteProfiles EH domain profile. 1 90 IPR000261 GO:0005515
Gma06g00143 1105 ProSiteProfiles EF-hand calcium-binding domain profile. 1 34 IPR002048 GO:0005509
Gma06g00143 1105 MobiDBLite consensus disorder prediction 511 529 - -
Gma06g00143 1105 ProSiteProfiles EH domain profile. 374 457 IPR000261 GO:0005515
Gma06g00143 1105 SUPERFAMILY EF-hand 2 79 IPR011992 -
Gma06g00143 1105 MobiDBLite consensus disorder prediction 213 249 - -
Gma06g00143 1105 MobiDBLite consensus disorder prediction 506 529 - -
Gma06g00143 1105 Pfam Cytoskeletal-regulatory complex EF hand 368 453 IPR000261 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma06g00143 Gma-Chr6 1242218 1257503 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma06g00143 1 1041 EF-hand Containing Proteins AT1G20760 51.893 0.0 924
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma06g00143 K12472 - gmx:100784075 1991.85
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma06g00143 06 1242218 1257503 Gma06g00143 06 1242218 1257503 ECH