Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma06g00141 ATGAGCATAATGTTTTCTGAAAGATTGGGGGCAGACGAATCTCATTGTCAAGATTTACAGAGTTTGAGTGTGTCAAAGCGACTTGTGAGGAGTGTTAGCCAGAAGTGGAGGAAGAAGAGTAACAAGAATTGCGGGGAAGTGGCTGATGATGTAAATGGAGTTTCTTTAACATGCTTAAATCTGTATGGACGAGGTGGGGGCTGCAAGGTAGGTGCTGACACCACTGATGATTTTGGCGATTCAAGCAGTAGAAGGAGATCTAGTGCCAGTGACGAAGGAAAGGGATATAAGCCAATTTGTGGCCCGGAAGAAACTGCTGTGGATTGCTTTTCATATGGGGTGAAGGACAGGTTTTGGAGGAGACACAACCGAAAGAATTCTGAGCTTGAAGAATTGTTTACAAACAATAGAATGCATATCTTTCTTCCTGATGATATTCTTGAAATGTGTTTGGTTAGGCTCCCATTGACAAGTCTCATGAATGCCCGTCTCGTGTGTAAAAAATGGAGGTCATTGACCACCACGCCTAGGTTCCTCAAAATAAGAAGGGAGGGTTCATATCAAAGTCCATGGTTGTTTCTGTTCGGTGTTGTTAAAGATGGATTTTGTTCTGGTGAGATACATGCGCTGGATGTGTCTCTGAATCAATGGCACAGGATAGATGCTCATTTTCTCAGAGGAAGGTTCTTGTTCTCTGTTGCTGGTATACAGGATGATATCTTCATTGTTGGAGGATGTTCTAGCTTGACTAACTTTGGGAAAGTGGATAGGAGCTCATTCAATACACACAAAGGGGTGCTTGCATTTAGTCCCTTGACAAAATCTTGGCGTAAAATGCCATCCATGAAATATGCTAGATCAAATCCTATATTAGGAGTCTCTGAGGTCAGTTTGGATTTTCCAACTTGTCAAAGTCATCAAAGTCGGCAGGATAGACGTTTTCCAAGATCAAGGATTGGTGGGGTTTCAGACGTCTATGAGGATCCCCACAAGCTTTCAATGAGACGCCATTGCAGACCTGCTTTTAATGAGACTGAAGCTTTGTCTCTGCCCAGTCGAAAGACATACAAATTCCTTAGGCAAAAAAGTGAGCATTCAAGCTCAAAGGGCAGTAAAAGATTTTTGTTGATAGCTGTTGGAGGTCTGGGATCTTGGGATGAGCCTCTGGACTCTGGAGAAATATATGATTCTGTGTCAAATAAATGGACTGAAATCCCAAGATTACCTTTCGATTTTGGGGTTGCTCGTTCTGGAATTGTTTGTGGCAGGATGTTTTATGTTTATTCTGAAACAGACAAGCTTGCAGCATATGACATAGAACGGGGTATCTGGATTGCAATTCAAGCCACTCCAATCCCACCTCGTGTACATGGGTACTACCCCAGACTTGTATCTTCTGATGGTCGCCTTTTCATGCTCTCAGTGTCCTGGTGTGAAGGGGATGGTCAGATTGGGAGACGAAACAAGGCTGTTAGAAAATTGTGGGAGTTGGATCTCATGTATCTTACCTGGACTGAAGCCTCAGCGCATCCAGATGCCCCAATGGACTGGAATGCTGTTTTTGTGTCGGATAAAAGCCTGATTTTTGGGGTGGAGATGTTCAAAATAATTGGTCGGGTATTGGGTTTTTTCACCGTCTGTGATGTGTCTGATATGGCAAACTGGAACCATATTTCAAGGGATCATGTTACTCATGAGCTGGACGTTTCTTCTTGCTTGACCAAATCTGTGGCAGTGCTACACCTTTGA 1749 0.4334 MSIMFSERLGADESHCQDLQSLSVSKRLVRSVSQKWRKKSNKNCGEVADDVNGVSLTCLNLYGRGGGCKVGADTTDDFGDSSSRRRSSASDEGKGYKPICGPEETAVDCFSYGVKDRFWRRHNRKNSELEELFTNNRMHIFLPDDILEMCLVRLPLTSLMNARLVCKKWRSLTTTPRFLKIRREGSYQSPWLFLFGVVKDGFCSGEIHALDVSLNQWHRIDAHFLRGRFLFSVAGIQDDIFIVGGCSSLTNFGKVDRSSFNTHKGVLAFSPLTKSWRKMPSMKYARSNPILGVSEVSLDFPTCQSHQSRQDRRFPRSRIGGVSDVYEDPHKLSMRRHCRPAFNETEALSLPSRKTYKFLRQKSEHSSSKGSKRFLLIAVGGLGSWDEPLDSGEIYDSVSNKWTEIPRLPFDFGVARSGIVCGRMFYVYSETDKLAAYDIERGIWIAIQATPIPPRVHGYYPRLVSSDGRLFMLSVSWCEGDGQIGRRNKAVRKLWELDLMYLTWTEASAHPDAPMDWNAVFVSDKSLIFGVEMFKIIGRVLGFFTVCDVSDMANWNHISRDHVTHELDVSSCLTKSVAVLHL 582
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma06g00141 582 Gene3D - 360 567 IPR015915 GO:0005515
Gma06g00141 582 SUPERFAMILY F-box domain 142 204 IPR036047 GO:0005515
Gma06g00141 582 MobiDBLite consensus disorder prediction 77 96 - -
Gma06g00141 582 ProSiteProfiles F-box domain profile. 136 181 IPR001810 GO:0005515
Gma06g00141 582 Pfam Kelch motif 376 409 IPR006652 GO:0005515
Gma06g00141 582 Pfam Kelch motif 228 282 IPR006652 GO:0005515
Gma06g00141 582 PANTHER OS09G0555300 PROTEIN 4 582 - -
Gma06g00141 582 Gene3D - 155 298 IPR015915 GO:0005515
Gma06g00141 582 PANTHER OS09G0555300 PROTEIN 4 582 - -
Gma06g00141 582 SMART fbox_2 142 182 IPR001810 GO:0005515
Gma06g00141 582 MobiDBLite consensus disorder prediction 78 92 - -
Gma06g00141 582 Pfam F-box domain 142 178 IPR001810 GO:0005515
Gma06g00141 582 SUPERFAMILY Kelch motif 190 530 IPR015915 GO:0005515
Gma06g00141 582 SMART kelc_smart 239 296 IPR006652 GO:0005515
Gma06g00141 582 SMART kelc_smart 375 419 IPR006652 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma06g00141 Gma-Chr6 1233770 1236583 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma06g00141 - - gmx:100781930 1176.39
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma06g00141 06 1233770 1236583 Gma06g00141 06 1233770 1236583 ECH