Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma06g00137 ATGGCCACCCACGCGGCTCTAGCTTCTACAAGGATCCCCACTAACACCAAGTTCCCATCCAAGGCTTCACACTCTTTCCCAACCCAATGCGCCTCAAAGAGACTTGAGGTGACAGAATTCTCTGGGCTAAGATCCACTTCATGTGTGACATATGCTAACGATGCTAGAGAATCTTCCTTTTTTGATCTTGTAGCTTCCCAACTCACTCCCAAGACCAATGGATCATCAACTCCTGTGAGGGGAGAGACAGTGGCCAAGTTGAAGGTGGCAATCAATGGTTTCGGACGCATTGGTAGAAACTTCCTTCGCTGCTGGCACGGCCGAAAAGACTCACCCCTTGAGGTCGTTGTTGTCAACGACAGTGGTGGTGTCAAGAATGCTTCGCACCTGCTTAAATATGATTCCATGCTGGGAACTTTTAAAGCAGATGTGAAAATACTGGACAATGAAACCATCACTGTTGATGGTAAGCCCATCAAGGTTGTTTCAAGCAGGGACCCTCTTAAGCTTCCTTGGGCTGAACTTGGAATTGACATTGTTATTGAGGGAACCGGAGTGTTTGTGGATGGCCCTGGGGCTGGTAAACACATCCAAGCAGGTGCCAAGAAAGTTATTATCACTGCTCCTGCAAAGGGTGCTGATATTCCAACTTATGTTGTTGGTGTAAATGAAGGGGACTACACTCATCAGATCTCTAACATTATAAGCAACGCTTCCTGCACCACAAACTGTCTTGCTCCCTTTGTGAAGATCCTGGATGAAGAGTTTGGAATTGTGAAGGGAACCATGACAACCACACATTCCTACACAGGAGACCAGAGGCTTTTGGATGCTTCACACCGTGACTTGAGAAGAGCCAGGGCTGCAGCACTGAACATTGTCCCAACCAGCACTGGAGCTGCCAAGGCTGTGTCTCTAGTGTTGCCACAGCTGAAGGGCAAGCTTAATGGAATAGCGCTCCGTGTGCCTACACCCAATGTTTCAGTTGTTGACCTTGTTGTGAATGTTGAGAAGAAGGGTCTTACTGCTGAAGATGTGAATGCAGCATTCAGAAAGGCAGCTGAGGGTCCACTGAAAGGTGTGTTGGACGTGTGTGATGTTCCACTTGTGTCTATCGACTTCCGCTGCTCTGATGTTTCCTCTACTATTGACTCCTCCTTGACTATGGTCATGGGAGATGACATGGTTAAGGTGGTTGCTTGGTATGACAATGAATGGGGTTACAGCCAAAGGGTGGTGGATTTGGCACACCTAGTAGCAAGCAAGTGGCCAGGGGCAGCTAAAGCAGGGAGTGGAGACCCATTGGAGGAATTCTGCGAGACAAACCCTGCTGATGAGGAATGCAAAGTATATGAATAG 1359 0.4812 MATHAALASTRIPTNTKFPSKASHSFPTQCASKRLEVTEFSGLRSTSCVTYANDARESSFFDLVASQLTPKTNGSSTPVRGETVAKLKVAINGFGRIGRNFLRCWHGRKDSPLEVVVVNDSGGVKNASHLLKYDSMLGTFKADVKILDNETITVDGKPIKVVSSRDPLKLPWAELGIDIVIEGTGVFVDGPGAGKHIQAGAKKVIITAPAKGADIPTYVVGVNEGDYTHQISNIISNASCTTNCLAPFVKILDEEFGIVKGTMTTTHSYTGDQRLLDASHRDLRRARAAALNIVPTSTGAAKAVSLVLPQLKGKLNGIALRVPTPNVSVVDLVVNVEKKGLTAEDVNAAFRKAAEGPLKGVLDVCDVPLVSIDFRCSDVSSTIDSSLTMVMGDDMVKVVAWYDNEWGYSQRVVDLAHLVASKWPGAAKAGSGDPLEEFCETNPADEECKVYE 452
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma06g00137 452 MobiDBLite consensus disorder prediction 8 24 - -
Gma06g00137 452 PRINTS Glyceraldehyde-3-phosphate dehydrogenase signature 196 209 IPR020831 GO:0016620
Gma06g00137 452 PRINTS Glyceraldehyde-3-phosphate dehydrogenase signature 234 252 IPR020831 GO:0016620
Gma06g00137 452 PRINTS Glyceraldehyde-3-phosphate dehydrogenase signature 261 277 IPR020831 GO:0016620
Gma06g00137 452 PRINTS Glyceraldehyde-3-phosphate dehydrogenase signature 317 334 IPR020831 GO:0016620
Gma06g00137 452 PRINTS Glyceraldehyde-3-phosphate dehydrogenase signature 358 373 IPR020831 GO:0016620
Gma06g00137 452 Pfam CP12 domain 429 452 - -
Gma06g00137 452 Gene3D - 88 416 - -
Gma06g00137 452 Pfam Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain 88 189 IPR020828 GO:0051287
Gma06g00137 452 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 86 256 IPR036291 -
Gma06g00137 452 Gene3D Dihydrodipicolinate Reductase; domain 2 239 404 - -
Gma06g00137 452 SUPERFAMILY Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain 240 403 - -
Gma06g00137 452 MobiDBLite consensus disorder prediction 1 24 - -
Gma06g00137 452 Pfam Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain 245 402 IPR020829 GO:0016620
Gma06g00137 452 ProSitePatterns Glyceraldehyde 3-phosphate dehydrogenase active site. 238 245 IPR020830 GO:0016620
Gma06g00137 452 PANTHER GLYCERALDEHYDE-3-PHOSPHATE DEHYDROGENASE GAPB, CHLOROPLASTIC 1 452 - -
Gma06g00137 452 SMART gp_dh_n_7 87 240 IPR020828 GO:0051287
Gma06g00137 452 TIGRFAM GAPDH-I: glyceraldehyde-3-phosphate dehydrogenase, type I 88 414 IPR006424 GO:0006006|GO:0016620|GO:0050661|GO:0051287
Gma06g00137 452 PANTHER GLYCERALDEHYDE-3-PHOSPHATE DEHYDROGENASE 2 1 452 IPR020831 GO:0016620
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma06g00137 Gma-Chr6 1202558 1205810 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma06g00137 K05298 - gmx:732571 859.751
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma06g00137 06 1202558 1205810 Gma06g00137 06 1202558 1205810 ECH
Gma04g00145 04 1231637 1234687 Gma06g00137 06 1202558 1205810 GST