Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma06g00125 ATGGCCACCACAGCCACCGAACCTCTCCCTTCCTCCGCTGAAATGCCTCCTGCCCCGCCTCCTCCGAAGCAACCGCCGCAACCGGTGGCGGCGGCGTCAGCAGTGAAGCCTGAGGCTCCATTGTCCGATTCGAAAGCTTCGGCGGAGGCGAACGTAATAGTGGTCCCGAGCTACTCTCGTTGGTTCTCGTGGGATTCGATTGACGAATGCGAGGTGCGTCACCTCCCCGAGTTCTTCGAATCGGCGTCGAAGAGCCCTAGGGTTTACAAGTACTACAGGAACTCGATCGTGAAGTACTTCAGGTACAATCCCACCCGAAAAATCACCTTCACCGATGTCCGCAAAACGCTCGTGGGAGACGTCGGTTCCATCCGAAGAGTCTTCGATTTCCTCGAAACTTGGGGGCTTATCAATTACCATCCCTCTTCGTCGCTCACCAAACCCTTGAAGTGGGACGACAAAGAGACCAAATCCGATTCTGCCTCCAACACCACCGAATCTTCTTCCGCTCCCGCCAAAGAAAACACTAAGAGACTCTGCAGTGGCTGCAAAGTCGTTTGCACCATAGCTTGTTTTGCCTGTGACAAGTATGATTTGACTCTTTGTGCGAGGTGTTATGTTCGTGGCAATTATCGAGTTGGTGTGAACTCTTCGGATTTTAGGCGAGTGGAGATAAGTGAGGAGACAAAGACGGATTGGAACGAAAAGGAGACCACGAATCTTCTGGAAGCTATTACGCATTACAGTGATGATTGGAAGAGGGTTTCTCAGCATGTTCCTGGCAGAACTGAGAAGGAGTGTGTTGCTCATTTTCTGAAGCTTCCTTTTGTGGATCAATTCCAGCATTATCAACAACACCCTGCTGTCAATGGCACTGATGACAGTTGTAATCCGTTAAAGAGGGTAACTAATGCTGATGCAGAATCTGAATTGGATACTGTTGCCTCTGCTGAACCCAATAAGAGAATGCGTCTCACGCCTCTTGCAGATGCAAGCAATCCGATTATGGCTCAGGCTGCTTTCCTGTCTGCTTTGGCTGGGTCAGAGGTTGCACAAGCTGCTGCTCAAGCTGCATTGACAACTCTGTCTGAGGTTTACAAAGCAACTAAAATAAATTATCGGTCGTTTCCGAGGAATACATTGCTGCAAGATTCATTTCAAGGATCTCGATTGCATGCAAACATACAGCTTGAGAAGGAAGAGTTAGATGTGGAAAAAGCAATTTCTGAGATTATAGAAGTTCAGATGAAAAATATCCAAGATAAGCTTGTTCAGTTTGAAGATTTGGACCTGCTGATGGAAAAAGAAGGCCAACAGCTGGAGCAAATGAAAAATATGTTTTTCCTTGATCAGCTTACTCTTTTATTTCATAAATCATCTGCACCAAAAACTGGAGAATGCCAAGAAGGCAATAATGTAAAGACGAACCATGGCTATTGA 1440 0.4715 MATTATEPLPSSAEMPPAPPPPKQPPQPVAAASAVKPEAPLSDSKASAEANVIVVPSYSRWFSWDSIDECEVRHLPEFFESASKSPRVYKYYRNSIVKYFRYNPTRKITFTDVRKTLVGDVGSIRRVFDFLETWGLINYHPSSSLTKPLKWDDKETKSDSASNTTESSSAPAKENTKRLCSGCKVVCTIACFACDKYDLTLCARCYVRGNYRVGVNSSDFRRVEISEETKTDWNEKETTNLLEAITHYSDDWKRVSQHVPGRTEKECVAHFLKLPFVDQFQHYQQHPAVNGTDDSCNPLKRVTNADAESELDTVASAEPNKRMRLTPLADASNPIMAQAAFLSALAGSEVAQAAAQAALTTLSEVYKATKINYRSFPRNTLLQDSFQGSRLHANIQLEKEELDVEKAISEIIEVQMKNIQDKLVQFEDLDLLMEKEGQQLEQMKNMFFLDQLTLLFHKSSAPKTGECQEGNNVKTNHGY 479
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma06g00125 479 MobiDBLite consensus disorder prediction 12 28 - -
Gma06g00125 479 Pfam SWIRM domain 56 139 IPR007526 GO:0005515
Gma06g00125 479 SUPERFAMILY Homeodomain-like 229 276 IPR009057 -
Gma06g00125 479 MobiDBLite consensus disorder prediction 1 42 - -
Gma06g00125 479 Gene3D - 228 279 - -
Gma06g00125 479 Gene3D - 59 143 IPR036388 -
Gma06g00125 479 Pfam SWIRM-associated region 1 393 456 IPR032451 -
Gma06g00125 479 PANTHER SWI/SNF COMPLEX SUBUNIT SWI3B 1 474 - -
Gma06g00125 479 SUPERFAMILY Homeodomain-like 49 149 IPR009057 -
Gma06g00125 479 ProSiteProfiles Myb-like domain profile. 225 275 IPR001005 -
Gma06g00125 479 ProSiteProfiles SANT domain profile. 228 279 IPR017884 -
Gma06g00125 479 PANTHER SWI/SNF COMPLEX-RELATED 1 474 - -
Gma06g00125 479 Coils Coil 397 417 - -
Gma06g00125 479 Pfam Myb-like DNA-binding domain 231 274 IPR001005 -
Gma06g00125 479 SMART sant 229 277 IPR001005 -
Gma06g00125 479 ProSiteProfiles SWIRM domain profile. 53 148 IPR007526 GO:0005515
Gma06g00125 479 CDD SANT 233 274 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma06g00125 Gma-Chr6 1100146 1103732 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma06g00125 191 271 EF-hand Containing Proteins AT3G07740 33.696 9.73e-07 49.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma06g00125 K11649 - gmx:100779777 882.093
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma06g00125 06 1100146 1103732 Gma06g00125 06 1100146 1103732 ECH
Gma04g00132 04 1133845 1137489 Gma06g00125 06 1100146 1103732 GST