Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma06g00115 ATGAGACGTGCTCTTGCTTTGCTTCCTCTTCTCTTCCTGTTTGTAGCGATTGGGGAATCAAGAAAAGATGGAGGAAAATATTGGAAAATGAACACGAGAGATCATCAGATGCCGAAAAAATTTAAGGCTCTCCTCAACCAAAACTTTGAGATCCAATCTGAAAAGATTCTCAAAACCAAGGAACAAATTCTTGAAGGTTGGCGCCCAGTGGACAACACTGGGGAATATGAAGTCGACTGGCCGCTTGTGAAGAAAGACGATGACCGCGACGACGAAGCTGAGTATTCCCCCTTTCTGGGACTTGAAAAGGGGTCTGTTCTTCAGGAGGCCAGGGTTTTTAATGACCCTCAACTAGATGCTAGGAGATGTTCACAGGTTATTACAAAACTCCTATACCTACTTAATCAGGGAGAGACGTTTACAAAGGTTGAAGCCACAGAAGTTTTCTTTGCTGTGACTAAGCTTTTCCAGTCTAAAGATATGGGATTAAGGAGAATGGTCTACCTGATGATAAAGGAGATCTCTCCCTCTGCTGACGAGGTTATCATCGTCACAAGCTCTCTCATGAAGGACATGAACAGCAAGATTGATATGTACCGAGCAAATGCCATTCGAGTGCTGTGTCGTATCACTGACGGAACCCTCCTTTCACAAATTGAGAGGTATTTAAAACAAGCCATTGTAGATAAAAATCCAGTTGTTGCAAGTGCTGCTCTAGTTAGTGGCATTCATCTACTCCAGACGAATCCTGAAATTGTAAAAAGATGGAGCAATGAAGTTCAGGAAGCTGTTCAATCAAGAGCAGCCCTTGTACAATTTCATGCACTGGGTTTGCTACATCAGATACGACAGAACGATCGGCTAGCAGTTAGCAAGCTGGTTACCAGCTTGACAAGGGGAACTGTTCGCTCACCTTTAGCACAGTGCCTTTTGATCCGTTACACAAGTCAGGTTATTCATGAATCAGGCAATACACAGTCAGGGGAACGCCCCTTCTATGATTATCTTGAGAGTTGCCTTCGCCACAAGTCAGACATGGTGATTTTTGAAGCTGCCAGGGCAATAACAGAGCTCAATGGCGTAACAAGCCGAGAATTAACTCCAGCAATTACTGTTCTTCAGCTTTTCTTAAGTTCGACTAAGCCAGTCTTGAGATTTGCTGCTGTCCGCACCTTGAACAAGGTGGCAATGACGCATCCAATGGCAGTCACCAACTGCAACATTGATATGGAAAGTTTAATCTCTGACCAGAACAGAAGCATTGCTACCCTTGCTATTACTACACTTTTGAAAACAGGAAATGAATCTAGTGTGGATCGTCTTATGAAGCAGATCACAAATTTCATGTCTGATATTGCTGATGAGTTCAAAATTGTTGTTGTTGAAGCAATAAGATCATTGTGCCTGAAGTTTCCTTTAAAATATCGATCTCTGATGAACTTCCTGAGTAATATTCTTAGGGAAGAAGGGGGTTTTGATTACAAGAAGGCAATTGTAGATTCAATTGTGATTCTCATTAGAGATATCCCTGATGCAAAGGAAGTGGGGTTGCTTCATCTTTGTGAGTTCATTGAAGATTGTGAGTTCACTTATTTGTCCACGCAGATACTTCACTTCCTGGGAATCGAAGGACCAAAAACATCAGACCCGAGCAAATATATTCGTTACATTTATAATAGAGTACATCTTGAGAATGCAATTGTTAGGGCCAGTGCTGTGAGCACACTGGCAAAATTTGGTGCTGCTGTTGATGTGTTAAAGCCCCGCATATTTGTTCTGCTAAGGCGATGTCTTTTTGACAGTGATGATGAGGTCCGTGATAGGGCTACACTTTACCTGGACACACTTGGAGGTGATGGTTCAGTTGTTGAGACTGATAAAGATGTAAAGGACTTCCTGTTTGGGCCATTTGATATCCCACTTGTCAATCTGGAGACTAGTTTGAAAAACTATGAACCTTCAGAAGAAGGTTTTGACATTAACTCTGTGCCCAAGGAGGTCAAGTCCCAGCCACTTGCAGAAAAGAAAGCCCCTGGTAAAAAGCCAACTGGTTTGGGTGCTCCCCCATCAACTGCAGATGCATATGAGAGGATGCTTTCGACCATTTCAGAGTGTGCAAACTTTGGGAAGCTTTTCAAGTCCTCAGCACCCGTGGAGCTCACTGAAGCTGAGACAGAATATGCTGTTAATGTCATTAAACACATTTTTGATAGGCATGTTGTGTTCCAGTACAACTGCACAAACACGATACCAGAGCAATTGTTGGAACATGTTATTGTGACTGTGGATGCTTCAGATGCTGATGAATTCTCAGAGGTGTTCTCCAAGCCTCTCAGGTCTCTTCCTTATGATTCACCTGGACAGACTTTTGTGGCATTTGAGAAGCCAGAGGGAGTGCCAACAGTTGGAAAATTTTCTAACATTCTGAAATTTATTGTCAAAGAGGTTGACCCAACCACTGGTGAGGCTGAAGATGATGGTGTCGAAGATGAATACCAGCTGGAGGATCTGGAGATTGTTGCAGCAGATTACGTGTTGAAAGTGGGGGTGTCTAATTTTAGGAATGCATGGGAAAGCTTAGGCCCTGATTTTGAGCGAGTGGATGAGTATGGTCTTGGTCCTAGAGAGAGCTTGGCTGAAGCTGTAAACACTGTTATCAACCTACTTGGCTTGGAGCCTTGTGAGGGCACAGAGGAGGTTCCACCCAATTCAAGATCACACACATGCTTATTGTCAGGTGTATTCATAGGGAATGTGAAGGTGCTTGTACGGCTGTCTTTTGGACTTGATGGTCCAAAGGATGTTGCAATGAAACTGTCTGTCAGATCAGAGGATGAAACAGTCAGCGATGCCATTCATGAGATTGTGGCAAGCGGCTAG 2880 0.434 MRRALALLPLLFLFVAIGESRKDGGKYWKMNTRDHQMPKKFKALLNQNFEIQSEKILKTKEQILEGWRPVDNTGEYEVDWPLVKKDDDRDDEAEYSPFLGLEKGSVLQEARVFNDPQLDARRCSQVITKLLYLLNQGETFTKVEATEVFFAVTKLFQSKDMGLRRMVYLMIKEISPSADEVIIVTSSLMKDMNSKIDMYRANAIRVLCRITDGTLLSQIERYLKQAIVDKNPVVASAALVSGIHLLQTNPEIVKRWSNEVQEAVQSRAALVQFHALGLLHQIRQNDRLAVSKLVTSLTRGTVRSPLAQCLLIRYTSQVIHESGNTQSGERPFYDYLESCLRHKSDMVIFEAARAITELNGVTSRELTPAITVLQLFLSSTKPVLRFAAVRTLNKVAMTHPMAVTNCNIDMESLISDQNRSIATLAITTLLKTGNESSVDRLMKQITNFMSDIADEFKIVVVEAIRSLCLKFPLKYRSLMNFLSNILREEGGFDYKKAIVDSIVILIRDIPDAKEVGLLHLCEFIEDCEFTYLSTQILHFLGIEGPKTSDPSKYIRYIYNRVHLENAIVRASAVSTLAKFGAAVDVLKPRIFVLLRRCLFDSDDEVRDRATLYLDTLGGDGSVVETDKDVKDFLFGPFDIPLVNLETSLKNYEPSEEGFDINSVPKEVKSQPLAEKKAPGKKPTGLGAPPSTADAYERMLSTISECANFGKLFKSSAPVELTEAETEYAVNVIKHIFDRHVVFQYNCTNTIPEQLLEHVIVTVDASDADEFSEVFSKPLRSLPYDSPGQTFVAFEKPEGVPTVGKFSNILKFIVKEVDPTTGEAEDDGVEDEYQLEDLEIVAADYVLKVGVSNFRNAWESLGPDFERVDEYGLGPRESLAEAVNTVINLLGLEPCEGTEEVPPNSRSHTCLLSGVFIGNVKVLVRLSFGLDGPKDVAMKLSVRSEDETVSDAIHEIVASG 959
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma06g00115 959 SUPERFAMILY Clathrin adaptor appendage domain 690 843 IPR013041 -
Gma06g00115 959 Gene3D - 841 957 IPR012295 -
Gma06g00115 959 SUPERFAMILY Subdomain of clathrin and coatomer appendage domain 844 956 IPR009028 GO:0006886|GO:0016192|GO:0030117
Gma06g00115 959 Pfam Organ specific protein 22 69 IPR024489 -
Gma06g00115 959 Gene3D Coatomer, gamma subunit, appendage domain 688 840 IPR037067 GO:0005198|GO:0006886|GO:0016192|GO:0030126
Gma06g00115 959 Pfam Coatomer subunit gamma-1 C-terminal appendage platform 842 956 IPR032154 -
Gma06g00115 959 PANTHER COATOMER SUBUNIT GAMMA 81 959 IPR017106 -
Gma06g00115 959 Gene3D - 100 392 IPR011989 -
Gma06g00115 959 MobiDBLite consensus disorder prediction 669 690 - -
Gma06g00115 959 SUPERFAMILY ARM repeat 111 640 IPR016024 -
Gma06g00115 959 Pfam Adaptin N terminal region 106 615 IPR002553 GO:0006886|GO:0016192|GO:0030117
Gma06g00115 959 PANTHER COATOMER SUBUNIT GAMMA 81 959 - -
Gma06g00115 959 PIRSF Gamma-COP 84 957 IPR017106 -
Gma06g00115 959 Pfam Coatomer gamma subunit appendage platform subdomain 694 839 IPR013040 GO:0005198|GO:0006886|GO:0016192|GO:0030126
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma06g00115 Gma-Chr6 985295 997631 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma06g00115 K17267 - gmx:100784608 1708.35
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma06g00115 06 985295 997631 Gma06g00115 06 985295 997631 ECH