Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma06g00108 ATGATTGTCCCTCTGATGATGATCCAGGTCCAATACAACCTCATGAGCCTCATCGCTTTCTCCGCTATCATCTTCTTGGGATCCACTCTCTACATCATGACCCGACCCACTTCCATCTTCCTCCTGGACTACTCCTGCTATCTCCCCCCTCAGCACCTCCGCGTTCGCTTCAACCAGTTCATGGACCACTCCACCCTCACCGGCGACTTCCTCCCCTCCTCCCTCCACTTCCAGCGCAAGATTCTCCTCCGCTCCGGCCTCGGCGAGGAAACCTACGTCCCCCAAGCCATGCACTCCATCCCCCCTCGCCCCTCCATTTCCGCCGCAAGGTTAGAAGCCGAGCAGGTCATGTTCGGCTCCCTCGACACCCTCTTCTCCGACACCAACGTCAACCCCAAAGACATCGGCATCCTTGTCGTCAACTGCAGCCTCTTCAACCCCACCCCTTCCCTCTCCTCCATGATCGTCAACAAGTACAAGCTCCGCGGGAACGTCAAAAGCTTCAACCTTGGCGGCATGGGCTGCAGCGCCGGCGTCATCGCCGTTGATCTCGCAAAAGACATGCTTCAGGTTCACCCCAACACCTACGCCGTCGTCGTCAGCACCGAGAACATAACCCAGAATTGGTACTTCGGAAACAACAAGGCCATGCTCATACCCAATTGCCTTTTCCGCGTTGGTGGGGCCGCGATTCTTCTCTCCAACAAAAGCTCCGACAGAGCAAGAGCCAAATACAAGCTGGTGCATGTGGTTAGGACTCACAAGGGGGCAGATGACAAGGCGTTTAGGTGCGTGTACCAGGAACAAGACGAGGTCGGAAAAACCGGTGTTTCTTTGTCCAAGGATCTCATGGCTATTGCTGGTGGGGCTCTTATGACTAACATAACCACGTTGGGTCCCCTTGTCTTGCCTATAAGTGAGCAATTTCTGTTCTTTCTCACACTTGTGGTGAAGAAGCTTTTCAATGCCAAGATGAAGCCTTATATCCCTGATTTCAAGCTCGCCTTTGACCATTTCTGCATTCACGCTGGTGGGAGGGCTGTGATCGATGAGCTGGAGAAGAATCTGCAGCTTCGGCCGGAGCACGTGGAGGCTTCGAGGATGACGCTGCATAGGTTCGGGAACACTTCTTCGAGTTCGATTTGGTACGAGTTGGCTTACACGGAGGCAAAGGGGAGGATCAGAAAGGGGCACAGGGTTTGGCAGATTGCGTTTGGGAGTGGGTTTAAGTGTAACAGTGCGGTGTGGGAGGCGCTTAGACATGTAAACCCTTCACCCAACACTCCATGGGAAAACTGCATTCATAGGTACCCCGTTCACATTCATACATAA 1332 0.5375 MIVPLMMIQVQYNLMSLIAFSAIIFLGSTLYIMTRPTSIFLLDYSCYLPPQHLRVRFNQFMDHSTLTGDFLPSSLHFQRKILLRSGLGEETYVPQAMHSIPPRPSISAARLEAEQVMFGSLDTLFSDTNVNPKDIGILVVNCSLFNPTPSLSSMIVNKYKLRGNVKSFNLGGMGCSAGVIAVDLAKDMLQVHPNTYAVVVSTENITQNWYFGNNKAMLIPNCLFRVGGAAILLSNKSSDRARAKYKLVHVVRTHKGADDKAFRCVYQEQDEVGKTGVSLSKDLMAIAGGALMTNITTLGPLVLPISEQFLFFLTLVVKKLFNAKMKPYIPDFKLAFDHFCIHAGGRAVIDELEKNLQLRPEHVEASRMTLHRFGNTSSSSIWYELAYTEAKGRIRKGHRVWQIAFGSGFKCNSAVWEALRHVNPSPNTPWENCIHRYPVHIHT 443
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma06g00108 443 Pfam 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal 336 417 IPR013747 -
Gma06g00108 443 PANTHER 3-KETOACYL-COA SYNTHASE 7 442 IPR012392 GO:0006633|GO:0016020|GO:0016747
Gma06g00108 443 SUPERFAMILY Thiolase-like 26 242 IPR016039 GO:0016746
Gma06g00108 443 CDD CHS_like 21 416 - -
Gma06g00108 443 SUPERFAMILY Thiolase-like 248 417 IPR016039 GO:0016746
Gma06g00108 443 PANTHER 3-KETOACYL-COA SYNTHASE 4 7 442 - -
Gma06g00108 443 PIRSF Very_long_ch_3-ktacl-CoA_syn 2 443 IPR012392 GO:0006633|GO:0016020|GO:0016747
Gma06g00108 443 Pfam FAE1/Type III polyketide synthase-like protein 31 320 IPR013601 GO:0006633|GO:0016020|GO:0016747
Gma06g00108 443 Gene3D - 72 418 IPR016039 GO:0016746
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma06g00108 Gma-Chr6 929225 930774 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma06g00108 6 439 Miscellaneous Gene Families AT1G19440 79.954 0.0 750
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma06g00108 K15397 - gmx:100776052 890.182
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma06g00108 06 929225 930774 Gma06g00108 06 929225 930774 ECH