Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma06g00103 ATGCAATCTCGGAAAATTGCGGACGTGTTGAACGTCTCGGATGGTGGTCGTGGGTTAGAAAACAAGGAAAAGAACCTCAGTTCAAACCTCCACAATGATCATGATAACCAAAACCAACACGTGCAGATTGATTCTGGCTCTGCCCTCCAACAATTTCTTGATCACATACCCATTAGTGCAATAGCTGGCATAAAAAATTCACCTGTTTTGGAATTGAAAGCTGGAGACAGTATAAGGGATGCAATTCATGCGTTGTACAAAAAGGATATATTTTCTGCAGCAATTGTGGATACGTCAGACTCCCATGCGGGCAGCATAAGGTTTTCAGATCGTTATATTGGTCTCATTGATTTTACAAGCATGGTTCTTTGGTGCCTTGAGGAATTTGATAAGATAAAAAATGATACCATGGAAAATCATCTCATGGATTTAGAGAACGATGGCCTTTTCTCCATCCTGGATCAGGTTCCTCAGATTGGGCTAACCAAGGTTAGCGAGTTGGCCAAGTCATTCCTCTGGGAACCATTTTTCCCAGTAAACATGGATGACACGGTTTTGCATGCTTTGCTACTTCTCTCTAAGCATCGGGTGCACGTTTTGCCGGTCATACAGGAACCTCAAGCTGGACTCATCGGTTATGTTACACAGAATGCAGTAGTCCAGCACCTTCTTCAATCAAGTGAACTAGAGTGGTTTGATAGCATTGCAGATAAGAACATATCAGATTTCCGATTTGAAAGCCAAGAAAATCCTAGTTGTGTATATGGGGACCAAACTGTTGCAAATGCTTTAGATTTGCTCTGGCAAAACCAAACTTGTGCAGTTGCTGTTGTAGATCGACAAACTAAGAAGCTCGTGGGTAATGTAAGGAACGGCGACGTTTATAATCTTGTAAAGAATAATGACCTCCTAAGAAATAGATCGATTTTAACTGTGAAAGAATTCATTCACATAGAGACTGACAAAGTAGTAACTGAACAAGCCATTGAACATGACCATGGGGCTTTACTCACAGCAGGAAGTCTCCGTCTGAAAAACAGCTTCATACCCAGAATGGACTTGCCCGTTGCCAACAAGGAAACTGAAACGCTCAAGCAAATAATGGAGCATACGACTGAGACTAATAGCAGTTTCAGCTTTCTGATCAATGATAATGAGCAAGTTACAGGGTTGCTCACACTAAGAGATATAATTCTGCAGTTTGCACCACCAAATATGAATTCTAGCATTAATGGAGGTGGGTTTTTCGAATTTGCCTTGGAGCAAAGTGGATGTCAGGTGAAAAATGGAACTATGATCCATCCGCTCTGCCACCAGGTGAATGGAAGGAAGTGGCGGTGGCGGTGCTTCACCGTCTGCACCGGTGAAGCAGTATTTGCACGATTTCTCGAAGCTGTTTCAGGTTTTTACATTGTCTCTTATGGACTCGGAATCTACCTTCTGAATCTCTTGATTGGTTTTCTCTCCCCTTTGGTTGATCCTGAGCTCGATCCCTCCGACTCCCCTTTGCTTCCAACCAAAGGCTCCGATGAGTTCAAACCCTTCATTCGCCGCCTTCCGGAGTTCAAGTTCTGGTATTCTTTCACCAAGGCTCTCTGCATAGCGTTTGTGATGACCTTTTTTTCCCTGTTTGATGTTCCTGTCTTTTGGCCTATATTACTCTGTTACTGGTTTGTTCTCTTTGTCCTTACAATGAGGCGCCAAGTTGCTCACATGATCAAATACAAATATATCCCCTTCAACTTGGGGAAGCAGAAGTATAGTGGTAAGAAATCTTCTGCAAGTAGCAGTGGCTCTCGTGCAGACTGA 1809 0.4301 MQSRKIADVLNVSDGGRGLENKEKNLSSNLHNDHDNQNQHVQIDSGSALQQFLDHIPISAIAGIKNSPVLELKAGDSIRDAIHALYKKDIFSAAIVDTSDSHAGSIRFSDRYIGLIDFTSMVLWCLEEFDKIKNDTMENHLMDLENDGLFSILDQVPQIGLTKVSELAKSFLWEPFFPVNMDDTVLHALLLLSKHRVHVLPVIQEPQAGLIGYVTQNAVVQHLLQSSELEWFDSIADKNISDFRFESQENPSCVYGDQTVANALDLLWQNQTCAVAVVDRQTKKLVGNVRNGDVYNLVKNNDLLRNRSILTVKEFIHIETDKVVTEQAIEHDHGALLTAGSLRLKNSFIPRMDLPVANKETETLKQIMEHTTETNSSFSFLINDNEQVTGLLTLRDIILQFAPPNMNSSINGGGFFEFALEQSGCQVKNGTMIHPLCHQVNGRKWRWRCFTVCTGEAVFARFLEAVSGFYIVSYGLGIYLLNLLIGFLSPLVDPELDPSDSPLLPTKGSDEFKPFIRRLPEFKFWYSFTKALCIAFVMTFFSLFDVPVFWPILLCYWFVLFVLTMRRQVAHMIKYKYIPFNLGKQKYSGKKSSASSSGSRAD 602
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma06g00103 602 ProSiteProfiles CBS domain profile. 172 229 IPR000644 -
Gma06g00103 602 Gene3D - 232 402 IPR046342 -
Gma06g00103 602 CDD CBS_pair_SF 249 398 - -
Gma06g00103 602 CDD CBS_pair_SF 174 294 - -
Gma06g00103 602 PANTHER OS01G0633400 PROTEIN 2 434 - -
Gma06g00103 602 SMART cbs_1 250 299 IPR000644 -
Gma06g00103 602 SMART cbs_1 354 402 IPR000644 -
Gma06g00103 602 SMART cbs_1 175 224 IPR000644 -
Gma06g00103 602 PANTHER AMP-ACTIVATED PROTEIN KINASE, GAMMA REGULATORY SUBUNIT 2 434 - -
Gma06g00103 602 ProSiteProfiles CBS domain profile. 348 408 IPR000644 -
Gma06g00103 602 Gene3D - 38 229 IPR046342 -
Gma06g00103 602 SUPERFAMILY CBS-domain pair 250 398 IPR046342 -
Gma06g00103 602 SUPERFAMILY CBS-domain pair 47 224 IPR046342 -
Gma06g00103 602 Pfam Rer1 family 442 588 IPR004932 GO:0016021
Gma06g00103 602 Pfam CBS domain 169 223 IPR000644 -
Gma06g00103 602 Pfam CBS domain 359 398 IPR000644 -
Gma06g00103 602 MobiDBLite consensus disorder prediction 16 36 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma06g00103 Gma-Chr6 886959 899536 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma06g00103 466 602 Miscellaneous Gene Families AT4G39220 81.884 1.03e-80 250
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma06g00103 - - gmx:100819351 846.269
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma06g00103 06 886959 899536 Gma06g00103 06 886959 899536 ECH