Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma06g00092 ATGACTGACATCATGTCCGCACCTGTTGACCCACCCATGAAACTTGGTCATGAAATTGAATATTCCGAGGATGAAAGGAAGAAAAAGCTTGGATCGTTCAAGAAGGTGGCAATCAGCGCCTCATCTAAGTTCAAGCATTCCTTTGCTAAGAGGGGGAGGAAGCACAGCAGGGTTATGTCTCTTTCTATCGAGGATGATCTTGATGCAGAAGAGTTGCAAGCAGTTGATGCTTTTCGCCAAGCACTCATCTTGGAAGAGCTATTGCCCTCAAAACATGATGATCATCATATGATGCTAAGATTCTTGAGAGCAAGGAAGTTTGACATTGAGAAAACAAAACAAATGTGGACAGATATGCTCAAGTGGAGGCAGGAATTTGGTGCTGACACTATCATGGAGGATTTTGAATTCAATGAACTAGAGGAAGTTCTAAAATACTACCCACAAGGGCATCATGGGATTGACAAGGATGGCCGACCTGTTTACATTGAAAAGTTGGGCCAGGTTGACTCTACCAAGCTGATGCAAGTAACAACAATGGAACGCTATCTCAAGTACCATGTAAAAGAGTTTGAAAGGACCTTCGCTGTTAAGTTGCCTGCATGTTCTATCGCGGCAAAGAAGCACATTGACCAAAGCACAACTATTTTGGATGTTCAAGGAGTGGGTCTTAAAAGTTTGAACAAAGCTGCAAGGGATCTCCTCCAGAGGCTTCAGAAAATTGACGGTGACAACTACCCTGAGTCACTGAACCGTATGTTCATCATCAATGCTGGTTCTGGATTTAGGCTCTTGTGGAACACCATTAAGTCATTCCTAGATCCCAAGACCACCTCAAAAATCCATGTCCTAGGTAACAAATACCAGAGCAAGTTGCTTGAAATCATTGATGCCAGtgaacttccagagttcttgggtggtacttgtacttgtgcagataaaggtggttgtatgctttctgacaagggtccatggaatgacccagatatcttgaagATGGTTCACAATGGCGAGGGCAAATGCAAGAGAAAAACCTTATCTGGGATTGAGGAGAAAAGAATCATAGAAGATGGTACTGCAAATCAAAATCTAGGAAACAAAGAATCATTTCCAGAGAGATACGATGTTGATGTACAATGTTTATCTCCAAAAAAGCAATGTACTGTGTATAAATATGACGCATTTGTCCCTGTGCTTGGCAAGCCAGTCGATTCATCTTGGAATACATTAACACAGAAAGATAAAGATGCTCTTTCTAAAGGTGCAGATTGTTTTCCTAGCAAGACTTGTGATGGGTATAGCAATCACTTTGTTGGAGGAATCATGGCCATTGTTATGGGAATTGTAACAATGATCCGCATGACAAGGAACATGCCAAGGAAAATCACAGAAGCAGCACTGTATGGCAGCTCAGGGTATTATGATGGCACTATGATGAAAGCAGCCACCTTTTCATGCAATGATTACATGGCCATGATGAAGCGCATGGCTGAACTAGAAGAGAAAGTCACTATCCTTAGCATGAAACCTGTCATTCCACCCGAAAAGGAGGAAGTGCTGAATAATGCTCTAGGCAGAGTCACCACTATCGAACAAGACTTGGTTGCAACAAAAAAGGCACTTGATGATGCCCTTGCTCGACAAGTAGAACTCCAAGCTCAAATTGACAAGAAGAAGAAAAAGAAGAACAAGTTGTTCCGCTTCCGCTGTTTTGCTGCGTGA 1722 0.399 MTDIMSAPVDPPMKLGHEIEYSEDERKKKLGSFKKVAISASSKFKHSFAKRGRKHSRVMSLSIEDDLDAEELQAVDAFRQALILEELLPSKHDDHHMMLRFLRARKFDIEKTKQMWTDMLKWRQEFGADTIMEDFEFNELEEVLKYYPQGHHGIDKDGRPVYIEKLGQVDSTKLMQVTTMERYLKYHVKEFERTFAVKLPACSIAAKKHIDQSTTILDVQGVGLKSLNKAARDLLQRLQKIDGDNYPESLNRMFIINAGSGFRLLWNTIKSFLDPKTTSKIHVLGNKYQSKLLEIIDASELPEFLGGTCTCADKGGCMLSDKGPWNDPDILKMVHNGEGKCKRKTLSGIEEKRIIEDGTANQNLGNKESFPERYDVDVQCLSPKKQCTVYKYDAFVPVLGKPVDSSWNTLTQKDKDALSKGADCFPSKTCDGYSNHFVGGIMAIVMGIVTMIRMTRNMPRKITEAALYGSSGYYDGTMMKAATFSCNDYMAMMKRMAELEEKVTILSMKPVIPPEKEEVLNNALGRVTTIEQDLVATKKALDDALARQVELQAQIDKKKKKKNKLFRFRCFAA 573
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma06g00092 573 PRINTS Cellular retinaldehyde-binding protein signature 97 119 - -
Gma06g00092 573 PRINTS Cellular retinaldehyde-binding protein signature 266 285 - -
Gma06g00092 573 PRINTS Cellular retinaldehyde-binding protein signature 299 308 - -
Gma06g00092 573 ProSiteProfiles CRAL-TRIO lipid binding domain profile. 139 313 IPR001251 -
Gma06g00092 573 SMART sec14_4 139 310 IPR001251 -
Gma06g00092 573 Pfam CRAL/TRIO, N-terminal domain 69 118 IPR011074 -
Gma06g00092 573 SMART CRAL_TRIO_N_2 94 119 IPR011074 -
Gma06g00092 573 Gene3D - 39 126 - -
Gma06g00092 573 Coils Coil 541 561 - -
Gma06g00092 573 PANTHER SEC14P-LIKE PHOSPHATIDYLINOSITOL TRANSFER FAMILY PROTEIN 7 565 - -
Gma06g00092 573 SUPERFAMILY CRAL/TRIO domain 139 334 IPR036865 -
Gma06g00092 573 Pfam CRAL/TRIO domain 145 307 IPR001251 -
Gma06g00092 573 SUPERFAMILY CRAL/TRIO N-terminal domain 65 135 IPR036273 -
Gma06g00092 573 Coils Coil 224 244 - -
Gma06g00092 573 CDD SEC14 140 308 IPR001251 -
Gma06g00092 573 Gene3D - 127 338 IPR036865 -
Gma06g00092 573 PANTHER CRAL-TRIO DOMAIN-CONTAINING PROTEIN YKL091C-RELATED 7 565 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma06g00092 Gma-Chr6 827435 831072 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma06g00092 73 304 Acyl Lipid Metabolism Gene Families AT5G47730 28.631 1.57e-20 91.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma06g00092 - - gmx:100798374 1133.24
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma06g00092 06 827435 831072 Gma06g00092 06 827435 831072 ECH
Gma04g00097 04 857358 861012 Gma06g00092 06 827435 831072 GST