Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma06g00028 ATGGAGGAAGGTAAAGAATGGAGCGTGAAAGAGAAGAACGAAACTACGACGCGACCATCCCTAAAATCGGATGTTCCATTCAACAAATATGAACTATGGAAACACAAGTTGAGGGACAATTGCTACAAAAGGGTGCGAGAGGACAGAACTCGCTTACTCTGGAAATTTAGATACAACCAACAGGAGGAGGAGGACATCGTCAAGTGTGCATTCCAGGATATTGTATCTGATGAATTGAACAAAATCAAACGCACGGATGAGCTGTTATGGGAGTATGAAGGTCCTCACCAGGGTGAATGCCAAGACATTTTGTTAGAAATGCAAAGGATCTTTTATCAAGATCTCAATTCCCAATCAACCATACAAGatttagaatgtgatattgaaacttgggaagatgaagtggatgagtacctggctcgtgCAGTTTTTGAGCATATGCAGCTAAATGAAGATGAGGCTCATGGGAAAGAGATTTGGTGTCCTATATGTAAGCAAGGAGAGCTTAAAGACAGTCACAATCTTATACACTGCACTCGTTGTGAACTTCAACTAAACAAAGCTAGTGAGCTTACTTTGGACTTTTTACGGGACCGGCTGGCTGAAGCCCACACAGAGCATCTTGATAAAGTGCAGAAGCTTCTGGCTTTGGACGTGAGCACCTGA 666 0.3919 MEEGKEWSVKEKNETTTRPSLKSDVPFNKYELWKHKLRDNCYKRVREDRTRLLWKFRYNQQEEEDIVKCAFQDIVSDELNKIKRTDELLWEYEGPHQGECQDILLEMQRIFYQDLNSQSTIQDLECDIETWEDEVDEYLARAVFEHMQLNEDEAHGKEIWCPICKQGELKDSHNLIHCTRCELQLNKASELTLDFLRDRLAEAHTEHLDKVQKLLALDVST 221
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma06g00028 221 Pfam Replication protein A interacting N-terminal 28 57 IPR028158 -
Gma06g00028 221 Pfam Replication protein A interacting middle 70 143 IPR028155 -
Gma06g00028 221 MobiDBLite consensus disorder prediction 1 20 - -
Gma06g00028 221 Pfam Replication protein A interacting C-terminal 160 218 IPR028159 -
Gma06g00028 221 PANTHER RPA-INTERACTING PROTEIN RPAIN 12 210 IPR028156 -
Gma06g00028 221 MobiDBLite consensus disorder prediction 1 18 - -
Gma06g00028 221 Coils Coil 121 141 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma06g00028 Gma-Chr6 232658 235986 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma06g00028 - - gmx:100803333 445.662
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma04g00027 04 231769 236373 Gma06g00028 06 232658 235986 GST