Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma06g00020 ATGACGATCCATTCGGTGGTGATACAGAAGCTGCTTAGCACCAATGCTCAGGTGGGTCGACGTGTTGCCGCTCACCATTTGAAGGAGTTCACCTATGGCTTCCGCAACAAAATGGCCATCATCGACTCCGACAAGACCCTCATTTGCATGCGCAGTGCCTGCAACTTCATGGCCTCCCTCGCCCGCCACAACGGCCGCTTCATGTTCATCAACACCAACCCTCTCTTCGACGAAATCTTCGACCTCATGACCAAGAAGGTGGGCTCCTACAGCCCCTCCACCAACTCTCTCTGGCGCACCGGCGGCTTCCTCACCAATAGCCTCAGCCCCAAGAAGTTCCGCTCTCGCAACAAGAAGCTCGTCTTCGGCCCCACCCAGCCTCCCGATTGCATCTTCATCGTCGACACCGAGCGTAAGTCTTCTGTCATCAACGAGGCTTTCAAGCTTCAAATTCCCGTCGTCGCCTTGGTCGACTCCGCCATGCCCCTCGACGTCTATAAGCGCATTGCCTATCCTGTTCCCGCCAATCATTCTGTCCAATTCGTTTAtttgttctgtaatttgattaccaaaaccttgcttcacgagaaggccaagtctgatgctgccaatcccgatattgatgctcaaatggaagaagctccgcgcaagggcaagggcaagacctatttggataaggtcgacgtaaccgtagttctctacgataatttagctcccttacctcaagATATAGAAGAAACTAAGAAGCTTTTGGACAAGCTTGTTGTTTTGAAGTTTAATGGTTCTCAAGGAAGAAATATGTGTTTTGACGGTCCCAAATCTGCAATTGATATTTGTGATGGACTGACATATCTGGATTTGATCATTAACCAGATTGAGACCCTCAATTCCAAGTATGGAAGCAGGGTTCCATTGCTTCTTTTCAATAAAGATGACATTCATGATAGTTCTCTAAAGGTTTTGGAGAAGTATTCTAAATCAAGTGTTGAAGTGCACACTTTTAAACAGGGTGAAGATCGAGAGTTGAAATCATTGGGTGAATATTATAGCAAGGAGGAAGTGCATCCATTTGATGATGTTGATGTGTTCCGTTTACTAATGACTGGTGGAACCCTTGATTCATTATTATCACAGGGTAAGGAGTATATCCTAGTGTTGAAGTCGGACAATGTGGCAACAGTCCTTGATCCAAACATACTAAATCATTTGATGATAAATGATATTGAATATTGCATGGAGGTGACACCAAGCAATTCGTTTAATTTAATGTTACCCACAACGAAATTTAAGCTTCGGGAGATTGGTGGAGACCAAGATAAACACTTGAAGGACAATTTCAAACTCATCGATACAACAAACATGTGGGTGAGTTTAAGAGCCATCAAGAGGTTTGTTGACACTGTTGAAGTAAGGCAGAAGAAGCCCTCATTTTCAAAGGACACAGCAGCTGGACCAGCAATAAAGTTCTTTGATAATGTATTTGGTGTCTCCGTGCCCGAATCTCGCTTTCTTCCCTTGGATGCAACATCAGATCTATTACTTCTTCAGTCAGATCTATACACTTGTAGAGAAGGTGTTTTAACTCGAAATCCAGCTAGAACTAACCCTTTAAATCCTGTGATAGACTTGGGACCTGAATTTGAAAAGTTTGGTGACTTTCAAAGTCGCTTCAGATCCATTCCAAGCATCATTGAGTTGGACAGTTTGATGGTGAGAGGTGATGTGTGGTTTGGGGCTAATATTACTTTGAAGGGGCAAGTGACTATTGCTGCAAAACCTGGCTTGAAATTGGAAATTCCTGATGGGGTGACGATTGAGAATAAGGAGATCAACGACCCTGCAGATATCTAA 1851 0.3998 MTIHSVVIQKLLSTNAQVGRRVAAHHLKEFTYGFRNKMAIIDSDKTLICMRSACNFMASLARHNGRFMFINTNPLFDEIFDLMTKKVGSYSPSTNSLWRTGGFLTNSLSPKKFRSRNKKLVFGPTQPPDCIFIVDTERKSSVINEAFKLQIPVVALVDSAMPLDVYKRIAYPVPANHSVQFVYLFCNLITKTLLHEKAKSDAANPDIDAQMEEAPRKGKGKTYLDKVDVTVVLYDNLAPLPQDIEETKKLLDKLVVLKFNGSQGRNMCFDGPKSAIDICDGLTYLDLIINQIETLNSKYGSRVPLLLFNKDDIHDSSLKVLEKYSKSSVEVHTFKQGEDRELKSLGEYYSKEEVHPFDDVDVFRLLMTGGTLDSLLSQGKEYILVLKSDNVATVLDPNILNHLMINDIEYCMEVTPSNSFNLMLPTTKFKLREIGGDQDKHLKDNFKLIDTTNMWVSLRAIKRFVDTVEVRQKKPSFSKDTAAGPAIKFFDNVFGVSVPESRFLPLDATSDLLLLQSDLYTCREGVLTRNPARTNPLNPVIDLGPEFEKFGDFQSRFRSIPSIIELDSLMVRGDVWFGANITLKGQVTIAAKPGLKLEIPDGVTIENKEINDPADI 616
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma06g00020 616 PANTHER - 1 616 IPR016267 GO:0003983|GO:0006011
Gma06g00020 616 PRINTS Ribosomal protein S2 signature 8 26 IPR001865 GO:0003735|GO:0005840|GO:0006412
Gma06g00020 616 PRINTS Ribosomal protein S2 signature 128 145 IPR001865 GO:0003735|GO:0005840|GO:0006412
Gma06g00020 616 PRINTS Ribosomal protein S2 signature 145 156 IPR001865 GO:0003735|GO:0005840|GO:0006412
Gma06g00020 616 SUPERFAMILY Ribosomal protein S2 8 197 IPR023591 -
Gma06g00020 616 Pfam Ribosomal protein S2 11 107 IPR001865 GO:0003735|GO:0005840|GO:0006412
Gma06g00020 616 Pfam Ribosomal protein S2 125 193 IPR001865 GO:0003735|GO:0005840|GO:0006412
Gma06g00020 616 CDD RPS2 11 194 IPR001865 GO:0003735|GO:0005840|GO:0006412
Gma06g00020 616 Gene3D Hexapeptide repeat proteins 507 616 - -
Gma06g00020 616 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 194 506 IPR029044 -
Gma06g00020 616 Gene3D - 2 193 - -
Gma06g00020 616 Pfam UTP--glucose-1-phosphate uridylyltransferase 231 584 IPR002618 GO:0070569
Gma06g00020 616 SUPERFAMILY Nucleotide-diphospho-sugar transferases 249 591 IPR029044 -
Gma06g00020 616 PANTHER UTP-GLUCOSE-1-PHOSPHATE URIDYLYLTRANSFERASE 1 616 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma06g00020 Gma-Chr6 176136 189330 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma06g00020 K00963 - gmx:100812583 1210.28