Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma05g02276 ATGGCCGGAAAACATGTCGGCGGCGAGGGCTTAGCGGCGAACCTCGCCGGAATGTCGAAGAATCAGCTCTACGATATCATGTCTCAGATGAAGAATCTAATCGAACAGAACCAGCAACAGGCCAGGCAGATCCTCATACAAAATCCTATATTAACCAAAGCGCTTTTCCAGGCACAAATTATGCTTGGAATGGTGCAAGCACCTCAAGTGGTTTCAAAAGTTCGGCCAATGGTTTCACAGAGCAATCAGCAGTCAGTACAACTAATACAAAAACCAAATATTCAGCCTGCTCCATTATTGCCTGGGCACGGTGGTGCACAGGATCAAGCAGGTGTATCTCAAACCCAAATTCCTCTGAGGAAACACCAGAACCAACCTTCAGTGCCAATTTCATCTGCTGTTCCTGCAATGAGTCATCAATCTCAGCCCATGGCTGCACATTCCTTGCCAATGCCACAACAGCATAAAGGACATCCAACTCCCCAAATGGCTCCAGTGTCTCTTCCACAATCATCACAACTTCCAAACGTACCTCTGCCTTCTCTTCATCAAACTCAAATGGCAACTGCTTCCAGTCAGTTACAGCAACCATTGCAGACATCGGGGTTTCCACCTCTGCAACCACCTCTGCCACCACAGATCAGACCAACTGCATTGCCAACTTTCCATCCCCAGTATCCCCCACAGGTGGGTGCAAACATGGGTTTCCAACATGCTGGTACTTCTCACAATCTTCCGCAATCAATGATTCATCCTGGTACAAAACCTTCTGCTAGTGTTGGGTCCACATTCCCACAGGGGCAGACACCACTTCCAGGTCAACCATCATCTCAGCCACCTTATCAGGTTGGGAATATGCCTTTAGGGCCCGATTTTGGCAATCAAGCTGGAAATGCTATGCAAGTAGATAGAGGGTCTTCTTGGTTGCCTGGTCCCTCAGAAAACCTAGCACATCTTTCTGGTCCTCCTGGTCAGATGAGTGCTGCTGCTAATCAGCTTCTTCGGCCTCCTGGGTTGACACCAGAGATGGAGAAGGCACTGCTTCAGCAGGTCATGAGCCTCACACCGGAGCAGATAAATCTCCTGCCTCCAGAACAAAGAAATCAAGTGCTGCAGCTACAACAGATGTTGCGTCAATGA 1140 0.4877 MAGKHVGGEGLAANLAGMSKNQLYDIMSQMKNLIEQNQQQARQILIQNPILTKALFQAQIMLGMVQAPQVVSKVRPMVSQSNQQSVQLIQKPNIQPAPLLPGHGGAQDQAGVSQTQIPLRKHQNQPSVPISSAVPAMSHQSQPMAAHSLPMPQQHKGHPTPQMAPVSLPQSSQLPNVPLPSLHQTQMATASSQLQQPLQTSGFPPLQPPLPPQIRPTALPTFHPQYPPQVGANMGFQHAGTSHNLPQSMIHPGTKPSASVGSTFPQGQTPLPGQPSSQPPYQVGNMPLGPDFGNQAGNAMQVDRGSSWLPGPSENLAHLSGPPGQMSAAANQLLRPPGLTPEMEKALLQQVMSLTPEQINLLPPEQRNQVLQLQQMLRQ 379
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma05g02276 379 MobiDBLite consensus disorder prediction 305 327 - -
Gma05g02276 379 MobiDBLite consensus disorder prediction 120 148 - -
Gma05g02276 379 Gene3D - 8 74 - -
Gma05g02276 379 MobiDBLite consensus disorder prediction 164 201 - -
Gma05g02276 379 PANTHER HYDROXYPROLINE-RICH GLYCOPROTEIN FAMILY PROTEIN 1 379 - -
Gma05g02276 379 MobiDBLite consensus disorder prediction 235 278 - -
Gma05g02276 379 Pfam Hinge domain of cleavage stimulation factor subunit 2 12 71 IPR025742 -
Gma05g02276 379 Pfam Transcription termination and cleavage factor C-terminal 345 379 IPR026896 GO:0031124
Gma05g02276 379 MobiDBLite consensus disorder prediction 120 207 - -
Gma05g02276 379 MobiDBLite consensus disorder prediction 235 271 - -
Gma05g02276 379 Gene3D - 340 379 IPR038192 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma05g02276 Gma-Chr5 43796107 43799425 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma05g02276 - - gmx:100811481 739.954
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma05g02276 05 43796107 43799425 Gma05g02276 05 43796107 43799425 ECH