Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma05g02263 ATGGCTTGCAACAGTTTCTCTTGGCTCATGCTTTCATCCACCAACGCCAAACGCGTTCCCTTGTTCTTCGTCCCAACCTCAACCTGCTTCAAATTCGATGTTCCTGTTGCTTCCCAAATCCAATGGCATACCCGCAGCAGAAACATCCCCCAAATCAAACGCCATTGGGTCGAAGCTTCTGATCAATCGCTCGCGTCTCAAGAAAGATTCAGCGTGGCGTCGTACAACATACTGGGGGACAGAAATGCTTCTCAACACTCGGATTTATACGTAAACGTTCCTTCTCGTTACATCAACTGGGGCCGTCGCAAGAGGGTTATTTGTGATGAACTCTTTGGATGGGACCCTGATATTATCTGCTTACAAGAGGTGGACAAGTATTTCGAACTCTCAGACATTATGGTTAAAGCAGGATATGCAGGATCTTATAAGAGACGCACTGGAGATGCAGCTGACGGTTGTGCAATGTTTTGGAAAGCTGATAAGTTCCGGTTACTAGAAGGAGAGAGCATTCAATTTAAGGACATTGGCCTTCGTGATAATGTTGCCCAACTTTCAGTTTTTGAGATGTGTGAATCTGACTCAAGAAGAATGTTAGTTGGTAACATCCACGTACTTTACAACCCAAACAGGGGAGAAGTTAAGTTAGGTCAAATTCGTTTTCTCTCATCAAGAGCACAGTACCTCTCAGAGAAATGGGGTAATACTCCCGTTGTGCTAGCTGGGGATTTTAATAGTACTCCTCAGAGTGGAATATACAAGTTCTTGTCATCATCTGAGCTTAATATCATGCTATATGACAGAAAGGAATTATCTGGACAGAAACGCTGTCGTCCTGCTCAAGTTTTAGGCGAGAATAAAGAAACAGTTGGTCCAATTGTCGCACTAGATGGCTTGTTTAAGTGCTGGACAGATGAAGAGGTAAAACTAGCAACTGGAGATTCCGAGCGTCATTTGGCTGTGCATCCATTGAAGCTGAATAGTTCGTATGCAACAATTAATGGTTCAACTAGTACACGGGGATTCAATGGTGAACCCTTGGCCACTTCCTATCACTCAAAATTTCTTGGCACTGTAGATTACTTATGGTACTCAGATGGTATTGTACCTACAAGAGTTCTTGATACTGTTTCAATAAGTGATCTCCTAAGGGCAGGTGGCCTCCCATGCAAGAAAGTGGGAAGCGACCATTTGGCCTTGGTTTCTGAATTTTCTTTCTCAGTTACCAACAATGAACCTACAGACATAGTGGCAGCAGCAGCATCACCTATAGTAGATATTGGAGAGCCTAACAATCAGCGGTCATAA 1308 0.4365 MACNSFSWLMLSSTNAKRVPLFFVPTSTCFKFDVPVASQIQWHTRSRNIPQIKRHWVEASDQSLASQERFSVASYNILGDRNASQHSDLYVNVPSRYINWGRRKRVICDELFGWDPDIICLQEVDKYFELSDIMVKAGYAGSYKRRTGDAADGCAMFWKADKFRLLEGESIQFKDIGLRDNVAQLSVFEMCESDSRRMLVGNIHVLYNPNRGEVKLGQIRFLSSRAQYLSEKWGNTPVVLAGDFNSTPQSGIYKFLSSSELNIMLYDRKELSGQKRCRPAQVLGENKETVGPIVALDGLFKCWTDEEVKLATGDSERHLAVHPLKLNSSYATINGSTSTRGFNGEPLATSYHSKFLGTVDYLWYSDGIVPTRVLDTVSISDLLRAGGLPCKKVGSDHLALVSEFSFSVTNNEPTDIVAAAASPIVDIGEPNNQRS 435
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma05g02263 435 PANTHER CARBON CATABOLITE REPRESSOR PROTEIN 4 37 408 - -
Gma05g02263 435 Gene3D Endonuclease/exonuclease/phosphatase 43 422 IPR036691 -
Gma05g02263 435 PANTHER CARBON CATABOLITE REPRESSOR PROTEIN 4 HOMOLOG 3 37 408 - -
Gma05g02263 435 SUPERFAMILY DNase I-like 62 409 IPR036691 -
Gma05g02263 435 Pfam Endonuclease/Exonuclease/phosphatase family 73 397 IPR005135 GO:0003824
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma05g02263 Gma-Chr5 43669303 43676317 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma05g02263 49 258 EF-hand Containing Proteins AT5G54130 27.876 2.94e-10 59.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma05g02263 - - gmx:100779393 882.478
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma05g02263 05 43669303 43676317 Gma05g02263 05 43669303 43676317 ECH
Gma05g02263 05 43669303 43676317 Gma08g00385 08 3231635 3240280 GST