Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma05g02262 ATGCACAGACAGTCCAATGGCAACCTCGTATGGTCGGTGAAGACGTTTACTTATGAATCGTTGAACAATGTTGCCACAGTGATAAATGGTGTGTCAGCTCTTGTGTTGACATTGCTGCCTGGGAAAGTTTCTATACTTGAAGGTATTCAGGGTTGGGAGCTCAGGCCAACTCTTCGTGGACCACGCTTTCCACGTTGGATGGATAAAGGTGTGTCCTCTTTCAACCACTTTATTCATGAGCTTTCTGTGGATTCCGATGTATCAAGCCTGGAATATTCATCTGCAGAAGACAGTGATGATGGATATGAAGAATATCCTGAATCTCCCTCATCTCAATGTTCTAGAGCCTCCAAACCTAATTGGATTTTGGCTCCTATTCACTTCTTGCTGGGGATTCCATTTCGCCTTTTTCAGTTAGCTTATTCTGGCTCTGGGCTGTCAGAACCGCCGGTTATCTCTGGCAATGAACATCCTTCACAACCACATTTTCCTAATAGAGTGCAAAGCCTCAAGGACCAAATTATCCATCGCACTACTGACAGGAGACGTGGGATCATTGAGGATCTCCATTTGGCCACGGAGATATTTATAGAAGCTGTTTTTGATGTTGTTCACAAGGCAATCCATCTTCTTCTTTCCCCATCAGAAGCTTTTGGAACATTGTCCAGGTTGTTTTCATCTCATGAAAGACGCATTTTAGTTGATAATGATGTTGTTGAGGAAGCCTCTACTTCTTCAGATACACTTGGAGAGAATGAGCCAACACCTACAGACAGGAATACCAGTTATCGTTCATCTCTGAACACAGATGCCCGGACATGTCAAGACGTTATAACAGAGCTAGGGTATCCATATGAAGCTATTCATGTGATCACTGCCGATGGATATGTTCTTCTTTTAGAAAGAATTCCTAGGCGAGATGCACGTAAAGCTGTTTATCTTCAGCATGGAGTCTTCGATTCATCAATGGGTTGGGTATCTAATGGTGTTGTTGGCTCTCCCGCTTTTGCAGCCTATGAtcaagGGTATGATGTATTTCTGGGAAACTTTCGTGGTTTGATTTCTAGGGAACATGTCAACAAGAATATCTCCTCTCGTGAATACTGGAAATACTCCATCAATGAACATGGGATTGAGGATATTCCTGCTATGATAGAGAAAATCCATCAAGTAAAAACTGCTGAGCTGAGGCTTAGTAAGCCTGATATTGAGGAGGAAAGCAATGATGAAGCCAAGCCCCATAGACTTTCAAGATTGGTTTTGTTATCACCTGCTGGTTTTCATCATGACTCTAACCTAGTCTTCTCTGTGGCGGAGCATGTATTGTTTTTGCTGGCCCCTATTTGGTCTCGAATTTTCCCAGCCTTCTATATACCAACCAGATTTTTCCGTATGCTTGTTAACAAGTTAGCTCGGGACCTGCAAAACCTACCTGCAGTTGGAGGATTGGTTCAAACTTTAGTAGGTTATGTTGTTGGTGGGGACAGCTCAAATTGGGTTGGAGTTTTAGGGTTACCACATTACAACATGAATGACATGCCAGGCGTATCTTTTGGTGTTGCTCTCCATCTTGCTCAGATAAAGCGTGCTAGAAGGTTTAGAATGTTTGATTATGGGAGTGCATATGCTAATGTGAAAGTGTATGGTTCCCCTGAGCCTGTGGACTTGGGTGAACACTATGGACTCATCGACATTCCTGTTGATCTGGTTGCTGGTCAGAAAGACACGGTGATACGATCTTCAATGGTGAAGAGACACTATAAATTGATGAAGGATGCTGGTGTGGATGTGTCATATAATGAGTTTGAATATGCTCATTTGGACTTTACCTTCTCTCACCGTGAAGAACTTTTGTCATATGTTATGTCACGTTTGCTGCTTGTGGAGCCCAATTCAAAGAATCAAGTAAATCAAAGGGCTCTAAGATCGAGGAAAAAAGGACAAAAGATGAGATAA 1956 0.4248 MHRQSNGNLVWSVKTFTYESLNNVATVINGVSALVLTLLPGKVSILEGIQGWELRPTLRGPRFPRWMDKGVSSFNHFIHELSVDSDVSSLEYSSAEDSDDGYEEYPESPSSQCSRASKPNWILAPIHFLLGIPFRLFQLAYSGSGLSEPPVISGNEHPSQPHFPNRVQSLKDQIIHRTTDRRRGIIEDLHLATEIFIEAVFDVVHKAIHLLLSPSEAFGTLSRLFSSHERRILVDNDVVEEASTSSDTLGENEPTPTDRNTSYRSSLNTDARTCQDVITELGYPYEAIHVITADGYVLLLERIPRRDARKAVYLQHGVFDSSMGWVSNGVVGSPAFAAYDQGYDVFLGNFRGLISREHVNKNISSREYWKYSINEHGIEDIPAMIEKIHQVKTAELRLSKPDIEEESNDEAKPHRLSRLVLLSPAGFHHDSNLVFSVAEHVLFLLAPIWSRIFPAFYIPTRFFRMLVNKLARDLQNLPAVGGLVQTLVGYVVGGDSSNWVGVLGLPHYNMNDMPGVSFGVALHLAQIKRARRFRMFDYGSAYANVKVYGSPEPVDLGEHYGLIDIPVDLVAGQKDTVIRSSMVKRHYKLMKDAGVDVSYNEFEYAHLDFTFSHREELLSYVMSRLLLVEPNSKNQVNQRALRSRKKGQKMR 651
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma05g02262 651 PANTHER LYSOSOMAL ACID LIPASE-RELATED 12 403 - -
Gma05g02262 651 PANTHER LYSOSOMAL ACID LIPASE-RELATED 410 635 - -
Gma05g02262 651 Pfam Partial alpha/beta-hydrolase lipase region 275 329 IPR006693 GO:0006629
Gma05g02262 651 Gene3D alpha/beta hydrolase 262 399 IPR029058 -
Gma05g02262 651 Gene3D alpha/beta hydrolase 406 626 IPR029058 -
Gma05g02262 651 MobiDBLite consensus disorder prediction 93 115 - -
Gma05g02262 651 MobiDBLite consensus disorder prediction 243 266 - -
Gma05g02262 651 PANTHER ALPHA/BETA HYDROLASE FAMILY PROTEIN 410 635 - -
Gma05g02262 651 PANTHER ALPHA/BETA HYDROLASE FAMILY PROTEIN 12 403 - -
Gma05g02262 651 SUPERFAMILY alpha/beta-Hydrolases 272 622 IPR029058 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma05g02262 Gma-Chr5 43664242 43667945 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma05g02262 12 637 Lipid Metabolism Gene Families AT1G18460 63.095 0.0 813
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma05g02262 - - gmx:100779931 1269.99
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma05g02262 05 43664242 43667945 Gma05g02262 05 43664242 43667945 ECH
Gma05g02262 05 43664242 43667945 Gma07g00810 07 8647653 8653902 PCT
Gma05g02262 05 43664242 43667945 Gma09g01736 09 42945140 42951576 PCT
Gma07g00810 07 8647653 8653902 Gma05g02262 05 43664242 43667945 PCT
Gma09g01736 09 42945140 42951576 Gma05g02262 05 43664242 43667945 PCT