Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma05g02122 ATGGAGATTTTCTCTGTCTTGTCGGAACCGTTTCTCGTCGCCCTCGCCGTGACCGCGCTCTGTTTCCTCTTCGCGCTCTTCGCTCTCCTCCGATCCTCCTTCTCCCTGCCCCGCAGATTCACGCCCCCGAGGAAGCACCACTGCGATTGCGCCTCCAATTCCGACGCCGGCGCCGTGCCCTACCTCAACGGCGGCTGCACTGAAATGCTCGAGCCCAGTCCCGTTCCGGCGCCGGCGGTGTTGACGGAGCGGCGAACGGGGTCGTCGATGATGGAGGAACTGGTTCCGGAGATTACAACGCACGCTCTCAGTTACTTGGATTATCCCAGTCTCTGTCGCCTCTCGATGACCAATTCGTTGATGCGAAAGGCTGCGAATGATGATAATGCTTGGAAGGCCCTTTATCACAAGGACTTCACGTTGGAACAAGATAGTGTTACGCCCACTAATGGGTGGAAGGCTTACTATGCTGCAACTAGAGCAATTGTGAATATTAATACAGAATTCTTCAACATTGTAAGAGATAAGTCTCTTCAAGCAATGAGTCGTTTTTGGCTGAATGCAGATTATGTCAAGTGCATTCATGCCTCAGGAGAACTCTTTTCCGGGTACAATGCAGTTATGCAGAGTTGGCAACTCGCATTCAACTGGGAGCAAGGATTGAACACTCAGGTTCAAGATGTACGTGCTCGCATCTTGACAGATATGGCTTGGGTTACAATGAAAACATACGTTGATATGGATACAGGACCATTTAATGTGACCAATATTTATGAGTTCCATAATGGACGGTGGTATATGGTTCATCATCACAGTTGTGTGATGAATGGGGATGTGGACCTGATGATTGTGCATGGATAA 861 0.4983 MEIFSVLSEPFLVALAVTALCFLFALFALLRSSFSLPRRFTPPRKHHCDCASNSDAGAVPYLNGGCTEMLEPSPVPAPAVLTERRTGSSMMEELVPEITTHALSYLDYPSLCRLSMTNSLMRKAANDDNAWKALYHKDFTLEQDSVTPTNGWKAYYAATRAIVNINTEFFNIVRDKSLQAMSRFWLNADYVKCIHASGELFSGYNAVMQSWQLAFNWEQGLNTQVQDVRARILTDMAWVTMKTYVDMDTGPFNVTNIYEFHNGRWYMVHHHSCVMNGDVDLMIVHG 286
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma05g02122 286 ProSiteProfiles F-box domain profile. 88 134 IPR001810 GO:0005515
Gma05g02122 286 SUPERFAMILY F-box domain 86 161 IPR036047 GO:0005515
Gma05g02122 286 Gene3D - 151 279 - -
Gma05g02122 286 SUPERFAMILY NTF2-like 157 272 IPR032710 -
Gma05g02122 286 Pfam SnoaL-like domain 163 275 IPR037401 -
Gma05g02122 286 Gene3D - 80 132 - -
Gma05g02122 286 PANTHER F-BOX PROTEIN SKIP8 1 285 IPR044260 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma05g02122 Gma-Chr5 42435070 42438668 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma05g02122 - - gmx:100807571 553.132
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma05g02122 05 42435070 42438668 Gma05g02122 05 42435070 42438668 ECH
Gma05g02122 05 42435070 42438668 Gma08g00229 08 1961578 1965312 GST