Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma05g02116 ATGGAGAACCTAATCTCTTTGGTCAACAAAATCCAGAGAGCTTGCACCGCCTTAGGCGACCACGGAGAAAACAGTGCACTCCCCACACTATGGGACTCTCTTCCCGCCATCGCCGTCGTCGGAGGCCAGAGCTCAGGAAAGTCCTCCGTCTTGGAGAGCGTTGTCGGCAAAGATTTCTTACCTCGTGGATCAGGTCGCATTGTTACGCGACGACCTCTCGTGTTGCAGCTTCACAAGATTGACGAGGGAAGCAGGGAGTACGCAGAGTTCCTCCACCTCCCGAGGAAGAGGTTCACCGATTTTGTTGCTGTGAGGAAGGAGATTCAGGACGAAACTGATAGAGAGACAGGACGAACCAAACAAATTTCGAGTGTTCCCATTCATCTTAGTATATACTCTCCTAATGTTGTTAACTTGACGCTCATTGATCTTCCCGGCCTTACGAAAGTAGCTGTAGAGGGTCAACCGGATAGTATTGTGAAAGACATTGAGGATATGGTTCGCTCCTACATTGAGAAGCCGAACTGTATAATTTTGGCTATTTCACCAGCCAATCAAGATCTTGCGACATCCGATGCAATTAAAATTTCCCGTGAAGTGGACCCTACTGGGGATAGGACCATTGGAGTTTTGACAAAGATTGATCTTATGGACAAGGGTACTGATGCTGTTGATATATTGGAAGGAAGAGCATATAGGTTAAAGTTTCCCTGGATTGGTGTTGTGAATAGATCACAACAAGACATAAACAAGAATGTTGACATGATTGCTGCTAGGCGTAGAGAACGTGAGTACTTTAATAGTACCCCTGAATATAAACACCTTGCAAACAGAATGGGTTCTGAACATCTGGCGAAGATGCTCTCAAAGCATTTGGAGACAGTAATCAAGTCCAAAATTCCTGGCATTCAATCCCTAATTAACAAAACAATTGCCGAACTTGAAGCTGAACTAACTCGTTTAGGAAAACCTGTTGCAGCTGATGCTGGGGGAAAGTTGTATGCTATCATGGAAATATGCCGCTCATTTGATCAAATATTTAAAGACCATCTTGATGGCGTGCGGCCTGGAGGTGATAAAATTTATAATGTCTTTGACAATCAGCTCCCTGCTGCTTTAAAAAGGTTGCAGTTTGATAAGCAGCTTTCAATGGAAAATATAAGGAAACTTATTACAGAAGCTGATGGGTATCAGCCTCATCTAATAGCTCCAGAACAAGGATACCGCCGTCTAATTGAATCTTCTCTAATAACTATTAGGGGCCCTGCTGAGGCAGCTGTTGATGCGGTTCACTCCCTGTTAAAGGACTTGgttcacaaagctatgagtgagactttgGACTTGAAGCAGTATCCTGGTCTCCGGGTTGAGGTTGGGGCTGCAGCTGTTGATTCACTCGAAAGAATGAGGGATGAAAGCAAAAGAGCAACACTGCAGCTAGTTGATATGGAGTGTGGCTATCTGACTGTTGATTTCTTTCGGAAGCTTCCTCAAGATGTTGATAAGGGTGGCAATCCCACACATTCAATTTTTGATAGATATAATGATTCATATCTAAGGCGAATTGGAACCACAATTTTGTCATATGTCAATATGGTCTGTGCTACTCTGCGGCATTCAATTCCCAAGTCCATCGTCTATTGTCAAGTGCGGGAGGCAAAACGAAGTCTACTTGATCACTTTTTTACCGAGCTAGGCAAAATGGAGATCAAGCGTCTGTCCTCGTTACTGAATGAGGATCCTGCAATTATGGAACGACGTAGTGCGCTCGCAAAGAGACTAGAGTTATACCGGAGTGCACAAGCTGAAATAGATGCAGTTGCTTGGTCTAAGTAG 1836 0.4368 MENLISLVNKIQRACTALGDHGENSALPTLWDSLPAIAVVGGQSSGKSSVLESVVGKDFLPRGSGRIVTRRPLVLQLHKIDEGSREYAEFLHLPRKRFTDFVAVRKEIQDETDRETGRTKQISSVPIHLSIYSPNVVNLTLIDLPGLTKVAVEGQPDSIVKDIEDMVRSYIEKPNCIILAISPANQDLATSDAIKISREVDPTGDRTIGVLTKIDLMDKGTDAVDILEGRAYRLKFPWIGVVNRSQQDINKNVDMIAARRREREYFNSTPEYKHLANRMGSEHLAKMLSKHLETVIKSKIPGIQSLINKTIAELEAELTRLGKPVAADAGGKLYAIMEICRSFDQIFKDHLDGVRPGGDKIYNVFDNQLPAALKRLQFDKQLSMENIRKLITEADGYQPHLIAPEQGYRRLIESSLITIRGPAEAAVDAVHSLLKDLVHKAMSETLDLKQYPGLRVEVGAAAVDSLERMRDESKRATLQLVDMECGYLTVDFFRKLPQDVDKGGNPTHSIFDRYNDSYLRRIGTTILSYVNMVCATLRHSIPKSIVYCQVREAKRSLLDHFFTELGKMEIKRLSSLLNEDPAIMERRSALAKRLELYRSAQAEIDAVAWSK 611
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma05g02116 611 SMART GED_2 514 607 IPR003130 GO:0003924|GO:0005525
Gma05g02116 611 Pfam Dynamin central region 222 489 IPR000375 -
Gma05g02116 611 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 23 309 IPR027417 -
Gma05g02116 611 SMART dynamin_3 1 252 IPR001401 GO:0003924|GO:0005525
Gma05g02116 611 ProSiteProfiles GED domain profile. 519 611 IPR020850 -
Gma05g02116 611 Pfam Dynamin GTPase effector domain 515 607 IPR003130 GO:0003924|GO:0005525
Gma05g02116 611 PANTHER DYNAMIN 2 610 IPR022812 -
Gma05g02116 611 Gene3D - 1 310 IPR027417 -
Gma05g02116 611 Pfam Dynamin family 37 214 IPR045063 -
Gma05g02116 611 PRINTS Dynamin signature 225 244 IPR022812 -
Gma05g02116 611 PRINTS Dynamin signature 34 52 IPR022812 -
Gma05g02116 611 PRINTS Dynamin signature 202 218 IPR022812 -
Gma05g02116 611 PRINTS Dynamin signature 59 76 IPR022812 -
Gma05g02116 611 PRINTS Dynamin signature 133 150 IPR022812 -
Gma05g02116 611 PRINTS Dynamin signature 183 201 IPR022812 -
Gma05g02116 611 ProSiteProfiles Dynamin-type guanine nucleotide-binding (G) domain profile. 31 301 IPR030381 GO:0005525
Gma05g02116 611 CDD DLP_1 33 301 IPR001401 GO:0003924|GO:0005525
Gma05g02116 611 Gene3D Dynamin, middle domain 333 587 - -
Gma05g02116 611 PANTHER DYNAMIN-LIKE PROTEIN 1E 2 610 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma05g02116 Gma-Chr5 42381159 42387468 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma05g02116 - - gmx:547855 1186.4
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma05g02116 05 42381159 42387468 Gma05g02116 05 42381159 42387468 ECH
Gma05g02116 05 42381159 42387468 Gma08g00222 08 1900293 1906691 GST
Gma11g00155 11 1184577 1189771 Gma05g02116 05 42381159 42387468 PCT