Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma05g02100 ATGGCAGAACCACCAAAGGGGGATGAGgaggacggcggagctgctttcgttctccaatccaaagGTGAATGGTGGCATGCGGGGTTTCACTTAACGACCGCAATTGTTGGACCCACGATACTAACCCTGCCATACGCGTTCAGGGGATTGGGGTGGGGACTTGGATTTATGTGCTTGACGGTGATGGGGATCGTCACCTTCTACTCTTACTTCCTCATGTCCAAAGTGCTCGATCACTGCGAAAAATCCGGTCGCCGGCATATTCGTTTCCGGGAACTAGCCGCTGACGTCTTAGGGTCCGGTTGGATGTTCTATTTTGTAATCTTTATTCAAACGGCAATCAACACTGGCGTTGGCGTAGGGGCAATCTTGCTTGCGGGGGAATGCCTTCAGATCATGTACTCCAATATCTCACCTCATGGACCCCTCAAATTGTACCACTTTATAGCAATGGTGACAGTGATAATGATAGTTTTATCTCAGCTTCCTTCTTTTCATTCCCTGCGACACATCAACTTGTGTTCACTACTTTTCGCCCTGGGCTACACCATCCTGGTGGTTGGTGCCTGTATTCATGCAGGTACATCAGAAAATGCCCCTCCAAGGGACTATTCCTTAGAACCTAAGAAGTCTGCAAGGGCCTTCAGTGCCTTCACTTCCATGTCCATACTTGCAGCAATATTTGGGAATGGCATATTGCCCGAGATACAAGCAACTCTAGCACCCCCTGCCACTGGGAAGATGGTAAAAGGCCTTTTTATGTGCTATTCCGTTATTTTTGTAACATTCTACTCTGCTGCAGTTTCTGGGTATTGGGTATTTGGAAACAAATCCAACTCAAACATTTTGAAGAGTCTGCTGCCAGATAGTGGACCTCCTTTGGCTCCAACTTGGGTTCTTGGACTTGCAATCATCTTTGTTCTTCTTCAACTCTTTGCCATTGGTCTGGTTTATTCTCAAGTTGCTTATGAGATAATGGAGAAGAAATCAGCTGATGTGAGGCAGGGGATGTTTTCCAAAAGAAATCTCATTCCTCGCATAATTCTCCGAACAATTTACATGATATTCTGTGGGGTTTTGGCAGCCATGCTACCATTTTTTGGAGACATTAACGGTGTGGTTGGTGCTATTGGTTTCATCCCTCTAGATTTCATTTTGCCTATGCTTCTATACAACATGGAATACAAGCCTCCAAAATCATCCTTCACTTACTGGATCAACGTCTCAATTATGGTGATATTCACGGGTGCTGGAATGATGGGTGCATTCTCTTCCATAAGGAAATTGGTTCTTGATGCCAACCAATTTAAGTTGTTTAGTAGTGATGTTGTGGATTAA 1338 0.4357 MAEPPKGDEEDGGAAFVLQSKGEWWHAGFHLTTAIVGPTILTLPYAFRGLGWGLGFMCLTVMGIVTFYSYFLMSKVLDHCEKSGRRHIRFRELAADVLGSGWMFYFVIFIQTAINTGVGVGAILLAGECLQIMYSNISPHGPLKLYHFIAMVTVIMIVLSQLPSFHSLRHINLCSLLFALGYTILVVGACIHAGTSENAPPRDYSLEPKKSARAFSAFTSMSILAAIFGNGILPEIQATLAPPATGKMVKGLFMCYSVIFVTFYSAAVSGYWVFGNKSNSNILKSLLPDSGPPLAPTWVLGLAIIFVLLQLFAIGLVYSQVAYEIMEKKSADVRQGMFSKRNLIPRIILRTIYMIFCGVLAAMLPFFGDINGVVGAIGFIPLDFILPMLLYNMEYKPPKSSFTYWINVSIMVIFTGAGMMGAFSSIRKLVLDANQFKLFSSDVVD 445
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma05g02100 445 Pfam Transmembrane amino acid transporter protein 21 429 IPR013057 -
Gma05g02100 445 PANTHER GABA TRANSPORTER 2 ISOFORM X1-RELATED 14 439 - -
Gma05g02100 445 PANTHER OS05G0424000 PROTEIN-RELATED 14 439 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma05g02100 Gma-Chr5 42260298 42265868 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma05g02100 1 445 Organic Solute Cotransporters AT5G41800 79.425 0.0 745
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma05g02100 - - gmx:100815232 893.649
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma05g02100 05 42260298 42265868 Gma05g02100 05 42260298 42265868 ECH