Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma05g02046 ATGTATGACCTTTATGTGATTCACTGGAAGAAGGGATGTTCAAGGTGTAAAAACTACTGTAAGAAAAGATGGGGAAGCTGGTTGGGCAAAATTGGGTGTTTTGGATATAAAAAAACCCGAAAGCGCATTGGGCATGCTGTCCTAGTTCCAGAACCAACCACCAATGGAGCTGATCCTGCTGCAGCTGCTAGTTCAATTCAAGCACCTAGTATAACGCTTCCTTTCGTAGCACCTCCCTCATCTCCTGCATCTTTCTTTCAATCAGAACCTCCATCAACTGCACAGTCACCAATTGGGAAAGTATCTCACACTTGTGTGTCTGCCAGCATCTACTCTCCTGGTGGCCCCGCCTCAATCTTTGCCATTGGACCTTATGCCCATGAAACCCAATTAGTCTCACCACCTGTTTTCTCGGCATCATCCACTGCTCCTTTCACTCCACCTCCTGAATCCGTCCACATGACTACACCTTCCTCGCCCGAGGTTCCATTTGCTCAGCTACTTGACCCCAACAATAAGAACAGTGAAACCTTTCAGAGGTTCCAAATATCTCACTATGACTTCCAATCCTATCAGTTTCATCCTGGAAGCCCTGTTGGTCAACTCATATCACCAAGATCTGCCATCTCAGTTTCCGGCACCTCATCGCCACTCCCTGACTCTGAATTTAATGCCACTTTCGCCCATATCCTTGATTTCCAAAGAGCAGACCCTCCCAAGCTTCTCAACTTAGATAATAAACTGTCTTCTTGTGAAAACCAGAAGTCAAATCATGGTTCCGGGTCTCTGACCCCAGATGCTGCAAGGTCCACAACTCAATCTGGTTTTCTATCAAATCATTGGGTTTCTGAGATCAAAATGTCCCCACATCCTAGCAATAATCGCCTCAATGAGATTAGTATAAATCATAGAGTTTCATTTGAATTATCCGCTCAAAAAGTGTTGAAATCTCTGGAAAACAAGCCAGCAGCATCAGCGTGGACTAATGTCCTGCCAAAATTGAAAAATGATGCTCCAACAACAGACAAAGAAGAAAAATCAGAAGAAAGTGCGCTTGATGACAAACAAGTAGTTTCTGAAGCTCACAATGATCAACCACTGGAAACCACTTTGGGTGGAGATAAGGCAACAACAGTTCATGAGAAGGATCAGTCCTTAACTCTTTCTTCCGCTAAAGAATTCAATTTTGATAATGCAGATGGAGGAGATTCTCTTGCTCCCAATATAGTTGCTGACTGGTGGGCTAATGAGAAAGTTGCAGGGAAGGAGAGAGAGGCATCCAAGGATTGGTCCTTTTTCCCAATGATTCAACCTGGTGTCAGCTAA 1326 0.4427 MYDLYVIHWKKGCSRCKNYCKKRWGSWLGKIGCFGYKKTRKRIGHAVLVPEPTTNGADPAAAASSIQAPSITLPFVAPPSSPASFFQSEPPSTAQSPIGKVSHTCVSASIYSPGGPASIFAIGPYAHETQLVSPPVFSASSTAPFTPPPESVHMTTPSSPEVPFAQLLDPNNKNSETFQRFQISHYDFQSYQFHPGSPVGQLISPRSAISVSGTSSPLPDSEFNATFAHILDFQRADPPKLLNLDNKLSSCENQKSNHGSGSLTPDAARSTTQSGFLSNHWVSEIKMSPHPSNNRLNEISINHRVSFELSAQKVLKSLENKPAASAWTNVLPKLKNDAPTTDKEEKSEESALDDKQVVSEAHNDQPLETTLGGDKATTVHEKDQSLTLSSAKEFNFDNADGGDSLAPNIVADWWANEKVAGKEREASKDWSFFPMIQPGVS 441
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma05g02046 441 PANTHER HYDROXYPROLINE-RICH GLYCOPROTEIN FAMILY PROTEIN 19 441 - -
Gma05g02046 441 MobiDBLite consensus disorder prediction 251 271 - -
Gma05g02046 441 PANTHER HYDROXYPROLINE-RICH GLYCOPROTEIN-LIKE 19 441 IPR040420 -
Gma05g02046 441 MobiDBLite consensus disorder prediction 330 386 - -
Gma05g02046 441 MobiDBLite consensus disorder prediction 337 361 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma05g02046 Gma-Chr5 41722749 41725816 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma05g02046 - - gmx:100791666 831.632
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma05g02046 05 41722749 41725816 Gma05g02046 05 41722749 41725816 ECH
Gma05g02046 05 41722749 41725816 Gma08g00151 08 1274466 1277351 GST
Gma01g02208 01 57303669 57306355 Gma05g02046 05 41722749 41725816 PCT
Gma11g00209 11 1664130 1666118 Gma05g02046 05 41722749 41725816 PCT