Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma05g02045 ATGAGTGTAGGTTCTCTTCATCCTCACAACAACCCCAATTTCCCAACCACTACTATAAACACCACAAACTCCTCTCCTCTCTTTTCTTGTATCCACATCTCCAACGGAAGAAAGAACATCCAAGAAATCATAGAAAAAAAAATGCCACCTTTTGCCGGATCCGAACCTGTTGGATTCCCTAAGCCAGATTCCAACATAGTTTCCATTGACGTTGGTGGCCAACTGTTCCAAACCACGAAACAGACACTAACCTCGGCGGGTCCGAAAACCTTCTTCTCCAGAATTGCGGCGGAATCTTCTGGACTCCACACGCCCTTCCTAGACAGAGACCCAGATCTGTTCTCGCTCCTTCTCTCTCTTCTCAGAACCGGTAACCTTCCCTCAAAGGCCAAAACTTTCGATCTCCAAGACCTAACTATTGAGTCTAAATTCTACGGCATCGAATCCCTCCTCGTCAATTCCCTCTCCAACCCTTCTCAATTGGAACCCTTTAATCTCCAAAAGTCGCTTCTTTTACCCTTGAACGGACGCGATTCCCCATCCGCCCTCGCCGCCACCGCCTCCGGCTCCCTCCACGTCGCGCACGGCAGCAAGATCACCTCCTTCGACTGGTCCCTCCGCCGCAAATCCACCGTCCTGACGCAATTCACCGCCGTGGACTCCCTCCTCGCGCTCTCGCCGTCGCTCGCCGCCGCCGGCGCCAACGACTTCTCCGGCCTCCAGATCCTCGACCTCGATAAGGGGCGCGTCAGGGAAACCCTAAATTGGGAAAACGTCACCAAATCCGGCTCCACCGTCCAAGCCATCGGATCCTCGCCGGAAAACATGTTTGTCAGCTTCGAATCCTCTCGGAGAAACTCGAATTCAATAATGGTCTACGATTTGCACACCCTGACACCCGTTACGGAGATCGGTCACAACGAGATCTTCGGCGCGGACATCGATTCGGCGATTCCGACGACGAAATTGCAATGGATTGAGGGTTACAATTTGTTAATGGCTTCTGGGTCCCACAGTGGGCCCTCCGGCGTGAGCGGGAACATACGGTTGTGGGATGTTCGGTCCGGCAACGTTGTTTGGGAGGTTTCCGAGAAAGTAGATTGTTTTGCTGACGTTGCGGTTTGTGATGCGCTGTCGGTTATATTTAAGGTTGGGGTGAATTCGGGGGAGGCATCCTACGTGGACTTGAGGAATTTGAGTAGCGGTGAGAGCGCGTGGGTATGTCTCGGAGATAAAAGAAAAATTTTGAATGGGAAGAAGGAAGGGTTTGGTTGCAAGATTGAAACGCAGGGGAATCAAGTGTTTTGCACCAAGGGTGGTGACATGGAGTTGTGGTCGGAGGTTGTTATGGGGTCTGGGAACAGTGGGAGGATCTTCAAGAAGAACCTGATGGGGAGAGTGAGGGATATGGGTGGGGCCAAGATTACCAATTTGGCCTTTGGAGGGAGCACCATGTTCTTGACTAGGAAGGATCAACAATGTGTTGAGGTGTGGCAGAGTTCTTCTAGGGAGTTTTGA 1518 0.5178 MSVGSLHPHNNPNFPTTTINTTNSSPLFSCIHISNGRKNIQEIIEKKMPPFAGSEPVGFPKPDSNIVSIDVGGQLFQTTKQTLTSAGPKTFFSRIAAESSGLHTPFLDRDPDLFSLLLSLLRTGNLPSKAKTFDLQDLTIESKFYGIESLLVNSLSNPSQLEPFNLQKSLLLPLNGRDSPSALAATASGSLHVAHGSKITSFDWSLRRKSTVLTQFTAVDSLLALSPSLAAAGANDFSGLQILDLDKGRVRETLNWENVTKSGSTVQAIGSSPENMFVSFESSRRNSNSIMVYDLHTLTPVTEIGHNEIFGADIDSAIPTTKLQWIEGYNLLMASGSHSGPSGVSGNIRLWDVRSGNVVWEVSEKVDCFADVAVCDALSVIFKVGVNSGEASYVDLRNLSSGESAWVCLGDKRKILNGKKEGFGCKIETQGNQVFCTKGGDMELWSEVVMGSGNSGRIFKKNLMGRVRDMGGAKITNLAFGGSTMFLTRKDQQCVEVWQSSSREF 505
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma05g02045 505 SUPERFAMILY POZ domain 64 152 IPR011333 -
Gma05g02045 505 SUPERFAMILY WD40 repeat-like 170 385 IPR036322 GO:0005515
Gma05g02045 505 Gene3D - 179 505 IPR015943 GO:0005515
Gma05g02045 505 PANTHER BTB/POZ DOMAIN-CONTAINING ADAPTER FOR CUL3-MEDIATED RHOA DEGRADATION PROTEIN FAMILY MEMBER 62 503 IPR045068 -
Gma05g02045 505 Pfam BTB/POZ domain 67 153 IPR003131 GO:0051260
Gma05g02045 505 PANTHER PROTEIN BINDING PROTEIN 62 503 - -
Gma05g02045 505 Gene3D Potassium Channel Kv1.1; Chain A 60 158 IPR011333 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma05g02045 Gma-Chr5 41717613 41719660 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma05g02045 - - gmx:100792189 927.546
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma05g02045 05 41717613 41719660 Gma05g02045 05 41717613 41719660 ECH
Gma05g02045 05 41717613 41719660 Gma08g00150 08 1270563 1272427 GST