Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma05g02038 ATGGACCCCAAAAACGTGAAATCGGACCTGGTTCTCATTCTCGACTACGGTTCCCAATACACCCACCTCATCACTCGCCGCATCCGTAGCCTCTCCGTCTTCTCCCTCTGCATCTCCGGCACCTCCTCTCTCTCCACCATCGCCGACCTCAACCCCTCCGTCGTCATTCTCTCCGGCGGGCCCCACTCCGTCCACACCCCCGACTCCCCCTCCTTCCCCGACGGCTTCCTCCAGTGGGCCCAGTCCAATGGCGTCACCGTCCTCGGCATCTGCTACGGCCTCCAGCTCCTCGTCCAGCGCCTAGGCGGCGACGTCCGCGTCGGAGACAAGCAGGAGTATGGCCGCATGGAAATCTGTGCCGATAAACCCTCCGCGCTCTTTGGCCCTGAGAAAGTCGGTAAACGACAGGTCGTTTGGATGAGCCATGGCGACGAGGCCGTCGCGCTGCCCGATGGATTCCACGTCGTCGCCCGCAGCGACCAGGGCGCTGTTGCCGCTATTGAAAACCCCCCCGCCAAGCTCTACGGCCTCCAGTATCACCCTGAGGTGACCCATACGGAGGATGGAATGGAGACATTGCGGCGTTTTCTGTTTGATGTTTGTGGTGTGGGAGCAGGGTGGAAGATGGAGGATGTGATGGAGGAGGAGATAAAGGTGATTAAAGAAACGGTGGGGCCTGATGAGCATGTGATTTGTGCTTTGTCTGGTGGTGTGGATTCCACTGTTGCTGCTACTCTGGTGCATAAGGCTATTGGGGATAGGCTTCATTGTGTGTTTGTGGATAATGGGTTGCTTAGGTATAAGGAGAGGGAGCGTGTGATGGAGACTTTTGAGAAGGATCTTCATTTGCCGGTTGTGTGTGTTGATGCCGTAAATCAGTTTCTTACGAAGTTGAAAGGTGTGGTGGATCCAGAGACCAAGAGGAAGATTATTGGGAAGGAGTTTATTTGTATTTTTGATGCTTTTGCTCAGGAGCTTGAGGGGAAGCTGGGGAAGAAGCCTTCTTATTTGGTTCAGGGGACGTTGTATCCTGATGTGATTGAATCTTGTCCTCCACCTGGGACCGGGAGAACCCATTCCCATACCATTAAGAGTCATCATAACGTTGGAGGCCTTCCAAAAGATATGAAGTTGAAGCTTATTGAACCACTTAAGCTTCTGTTCAAGGATGAGGTTCGTCAATTAGGGAGGATCTTGGATGTTCCTGTGGCCTTTCTAAGACGTCACCCATTCCCAGGGCCTGGTCTTGCAGTGAGAGTCTTGGGTGATGTGACTGAAGGAAATGCTTTAGATATTCTCCGACAGGTTGATGAGATCTTCATTCAGTCAATCAAGGATGCTGGGCTCTATGATTCAATATGGCAAGCTTTTGCAGTTTTCTTGCCTGTTCGATCGGTTGGAGTTCAAGGTGATCAAAGAACACACTCCCATGTTGTTGCTCTCAGAGCTGTTACAAGTCAAGATGGAATGACTGCTGACTGGTACTACTTTGAGCACAAGTTCCTTGACGATGTTTCCCGAAAGATCTGTAATGGTGTCCGTGGTGTAAACCGTGTTGTGCAAGATATTACCTCAAAGCCACCATCAACAATTGAATGGGAATAA 1605 0.5153 MDPKNVKSDLVLILDYGSQYTHLITRRIRSLSVFSLCISGTSSLSTIADLNPSVVILSGGPHSVHTPDSPSFPDGFLQWAQSNGVTVLGICYGLQLLVQRLGGDVRVGDKQEYGRMEICADKPSALFGPEKVGKRQVVWMSHGDEAVALPDGFHVVARSDQGAVAAIENPPAKLYGLQYHPEVTHTEDGMETLRRFLFDVCGVGAGWKMEDVMEEEIKVIKETVGPDEHVICALSGGVDSTVAATLVHKAIGDRLHCVFVDNGLLRYKERERVMETFEKDLHLPVVCVDAVNQFLTKLKGVVDPETKRKIIGKEFICIFDAFAQELEGKLGKKPSYLVQGTLYPDVIESCPPPGTGRTHSHTIKSHHNVGGLPKDMKLKLIEPLKLLFKDEVRQLGRILDVPVAFLRRHPFPGPGLAVRVLGDVTEGNALDILRQVDEIFIQSIKDAGLYDSIWQAFAVFLPVRSVGVQGDQRTHSHVVALRAVTSQDGMTADWYYFEHKFLDDVSRKICNGVRGVNRVVQDITSKPPSTIEWE 534
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma05g02038 534 Gene3D HUPs 208 418 IPR014729 -
Gma05g02038 534 Pfam GMP synthase C terminal domain 443 533 IPR001674 GO:0003922|GO:0005524|GO:0006164|GO:0006177
Gma05g02038 534 TIGRFAM guaA_Nterm: GMP synthase (glutamine-hydrolyzing), N-terminal domain 11 203 IPR004739 GO:0003922|GO:0005524|GO:0006177
Gma05g02038 534 ProSiteProfiles Glutamine amidotransferase type 1 domain profile. 10 206 - -
Gma05g02038 534 CDD GATase1_GMP_Synthase 11 197 IPR004739 GO:0003922|GO:0005524|GO:0006177
Gma05g02038 534 SUPERFAMILY Adenine nucleotide alpha hydrolases-like 196 428 - -
Gma05g02038 534 Gene3D - 419 534 - -
Gma05g02038 534 SUPERFAMILY Class I glutamine amidotransferase-like 9 237 IPR029062 -
Gma05g02038 534 Gene3D - 4 203 IPR029062 -
Gma05g02038 534 PRINTS Anthranilate synthase component II signature 11 25 - -
Gma05g02038 534 PRINTS Anthranilate synthase component II signature 55 64 - -
Gma05g02038 534 PRINTS Anthranilate synthase component II signature 86 97 - -
Gma05g02038 534 PRINTS Anthranilate synthase component II signature 176 189 - -
Gma05g02038 534 SUPERFAMILY GMP synthetase C-terminal dimerisation domain 413 534 - -
Gma05g02038 534 Pfam Glutamine amidotransferase class-I 13 199 IPR017926 -
Gma05g02038 534 Pfam tRNA methyl transferase HUP domain 229 273 - -
Gma05g02038 534 Hamap GMP synthase [glutamine-hydrolyzing] [guaA]. 8 534 IPR022955 GO:0003922|GO:0006177
Gma05g02038 534 PANTHER GMP SYNTHASE (GLUTAMINE-HYDROLYZING), PUTATIVE / GLUTAMINE AMIDOTRANSFERASE, PUTATIVE-RELATED 2 534 - -
Gma05g02038 534 ProSiteProfiles GMP synthetase ATP pyrophosphatase (GMPS ATP-PPase) domain profile. 207 408 IPR025777 GO:0003921|GO:0005524
Gma05g02038 534 CDD GMP_synthase_C 229 533 IPR001674 GO:0003922|GO:0005524|GO:0006164|GO:0006177
Gma05g02038 534 PANTHER GMP SYNTHASE-RELATED 2 534 - -
Gma05g02038 534 PRINTS Glutamine amidotransferase superfamily signature 55 64 - -
Gma05g02038 534 PRINTS Glutamine amidotransferase superfamily signature 86 97 - -
Gma05g02038 534 PRINTS Glutamine amidotransferase superfamily signature 176 189 - -
Gma05g02038 534 TIGRFAM guaA_Cterm: GMP synthase (glutamine-hydrolyzing), C-terminal domain 212 534 IPR001674 GO:0003922|GO:0005524|GO:0006164|GO:0006177
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma05g02038 Gma-Chr5 41663295 41666762 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma05g02038 K01951 - gmx:100794993 1083.94
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma05g02038 05 41663295 41666762 Gma05g02038 05 41663295 41666762 ECH
Gma05g02038 05 41663295 41666762 Gma08g00143 08 1211866 1215168 GST