Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma05g02033 ATGGGAAATCGACGCTTCACTCAGGTCGCAACCAGCGACGACGAGGACGAAGAGCCGCCGGCGCCGGCGCCTCCTCCCAAGCAGCAATCGTCCGTCAGTGCCTCCGAAGAAAACTGTTCGAAGCAGCAGCAGCAGCAGCAGCGCAAGAGGAAGAGGATGAAGCTCCAagaagaagaggaagaggagaaagaggaagagaagaaGAAGAGAAAAATCAAAGACAAGCAGGAAGAGAGATCCAACGAAGAAGAGGAACCGCCGCAGGAAGACGCCAAGCCCATTGGCGAACCGGTTAGGCTATCCGGAAAGGGAAGGGGCCGCAAAAAGCATTATGAATCCTTCGAGTACGACGGAAACCAATACATGCTGGAGGACCCTATACTTCTCACGCCTGAGGACAAAGACCAAAAGCCGTATGTGGCGATTATCAAGGACATTACTCAATCCCTGAATGGCAGCATGATGGTCACTGGACAGTGGTTTTATCGTCCTGAAGAAGCTGAAAGAAAAGGTGGTGGCAGCTGGCAATCATGTGACACAAGGGAGCTGTTTTATAGTTTCCACCGTGATGATGTTCCTGCAGAATCTGTTATGCATAAGTGTGTGGTTCATTTTGTTCCCATACACAAACAGCTTCCAAATCGTAAGCAGCATCCTGGGTTTATTGTGCAAAAGGTGTATGACACAGTAGAAAGGAAACTCTGGAAGCTAACTGATAAGGACTATGAGGACAATAAACAGCAAGAAATTGATGAGCTTGTTCAGAAAACTCTTCAACGTTTGGGCAAACTACTTGACATTGAGCCTGAAGAACCTGTTGCTGATCAGGAAGATCTGATGAAAAATAAAAGAATCTTAAGGAAAAAGAGCATTTCACCTCTTGATGTTTCAAAGGAGGAGGAAACAACTCGTCAAGGGGACCAACCTCTGAAACCTGAAACACCATGGAGTTGTGTAAATAATGCCTCAGAACATTATCGCATATTAGTCGATTTCAATGCTCTAACAGGAGATACCCATCGTGACAAATGTTTGGAGAAGTTGCTTCAAAGTGTTCAATTCATGTTTAATTCTGATGACAGCATAAAGAAGGAAGAGAAAGGAAATGACAATTCTGGTGCTGCCAACAATGGAAGCAATAACAAAAGTTTAGAATCTGCTAACGAATGTGAAGACAAGGTTCAAAAGAGTTCCAAGCCTTTTGTTTGGCCAGATGATGCTGTTCCAGCTGTAGTTGCTCTGGAAAAAGCTTCACATGATACCTTATCATCAGATTATCAGAAGTATAACCAAAAGCTACGACAATTAGTATTTAATCTCAAGAACAATGCAATCCTAGCACGCCGTCTACTAAATGGAGAGTTGGAACCTTCTATAATATTGAATATGACGCCCAATGAGTTGAAGGAGGGTTTGACTGCTGAGGAAACAACCAAGAAGGAGCCTGATGAGTCACAACACATGCAGATGACAGGTGCCCGATGCCATAGATGCACAGAGGGTAAGGTGGGCTTGAGGGATATTATCCATGCTGGACATGGTGATCGATATCAGCTGGAATGTACTGCCTGTGGTCATTCCTGGTTTGCTTCCCGTGATGAGGTGTCTGAGCTGACTATAGATGCATCAGATTCAAAAAGAAGTGTAGGCACGGCACCATGGGCCACTGCAAAATTTGAAGATGTTGAGAAGAAGCTGATAGTAGCAAAAGATCCTGCTTCTTGGGGTTCACCTTTTCTTCAGTTTACTTCTCCAAGATCTACTCTATCCAACAAAAAACCCCTCAATGGAAGATCTCCCTTGTATTCCGGGTCTTTGGATTCATCAATGGGACAAGAGTTGGAGCTGGATCTTGATGACAAGTCTTCAGTGGGTTTGAGTCCCAATACTGTTCTTCCACCTCATCAATACTGTGTGAATGTGAAGAAGAGATCTAAAAAGGGAAAACCCACTGGGAAAGATGATTTTTTTACTCTCAAGGAGGGCTTTGCTGGGATCAAATTTGCTCGCTTCCGCAGTTCTTCATGTAAGAGCCATCTCTCTAGACCTCATGAATTGGAAGGTAATACAGAAACCAGGCGCAGTTCCATGTATCAGAGTTCAGAGGAAGTGAAAAGTATAAAAAAAATGGGCACCATGGTAGAGGGAAGGAGAAAAATAGAAATTTCAAGGAGGAGTGACACCTCTTTCGTAGGTAGCATTGTTGATTCTTTATGTGGTTCAGATGATGAAGGTTCTGGGCTGAGATCTTCAGAGATATCCAGGTCCAGGACTTGCAAGGCGCCAGACTCTCCAAATAGCTTTATTGAAATCTGTATAAATTCAGATGTTAAAAATAAGAACTCTGCCACAGTACAAGGGAGAGAATCTATAAATTTGAAGTCCAGAAGTGACAAAGTTTCTGATTCTGTAATCAATGGCAATTATCATGTTGAAAAGGACATGGTCCACTGGCTGCAAAAGTCACTCTCAGCTAAGGCAGGGATCTCTCGCATGCCATCTCCATTAGGAAGTGATTGCTCATCGAGATCAAGTCCAAAAGTCCAAGTCACCCATTGCAGGAAAAGGTTGAATCATTTCACAAAGTCAAAATCATTGAGAAGTCCAGTGAGTAAGATACAGGAAAATAGTGAGATCAAATCAAATGGCATAGCAAACATTGCAAGACATAGGACTTATCAAAAATCATTGCTAAATGACTTATCCAACAAAGGAAAGCATTCTGACATTATTTCTGAATTTATCAGCAGAGAAATCCAGTATTCAGGTATAGCTTCTTCACCAGTTCATCTGCATGGCAATCTCAAAATGGAAAATAAACATGGAGTGCTGTTTTTTGAGTTCAAGGTGAAGTGCCCTGAAGATGTGTTTGTGGCCAAGACATGGAGAACAGGTAATGCTTTCAACTGGGTGTATACTTTTCACTCAATTGATAATAGAAAGAAGAGCAATGCCAATGGGTTGGGATCCCATGATTTTGACAAAGATTCCTCAATAGTAGCACAGATGCTAGTTTCCTGTAATTTAGGTTCTGAACTAGAAGACAAAGTATTTGACAACTCTATGGTGACAGAATTTGTGTTGTATGATTTTACACACTCAAGGCAGAGTGTTTCGCGTGAAAAAAAGTCTTTCTGTGAACTAGATGGTTCTAAAACTCCAAAAGCTTCCCATGTTGGATTGAAGGAGGAAACTTTGGGGCTGGATGGGAACCATGTGGTCAAAAATAAACTTCAAGACAAGCCTCTATCAAGCAGTGTTGAATTTGATGATTTAAATTCTTATCCTTACCTGTCCACTGAATGCTATCCAAACCTTGAAATTGCTGCCATTGTCTTGCAAATTCCGTTTTCTAAGAGAGAAAGCTTGAAGTACAAAAGAGGAGAAAGAAAAAGTGCTAAAGAATGTTCCAACAGAAGTGATCTCTCTGCAGTAAAAGATAGAAAAAGTCTTCATTATGACCAAATCCAGGAACAGGTAAAGGTGGTAATACCAACTGGCAATCATGGTTTGCCAAATGCTGAAAGCCAGGCTCCCTCGTCATTACTTGATCGACTGAGGCATGGTGGAGGTTGTGACTGTGGTGGCTGGGACATGGCCTGTCCCCTTATTCTTTTAGGCAATCCTACTATTCAATTTGCCGAAGACTGCTCACTCATGGAGGAACATCAACCATTGGAACTTTTTGTTCAGGGAGCAAAAGGAAGCAGTCCTACCTTCAGCATGACAAGAATTGAAGAGGGGCATTATGCTGTTGATTTTCATGCACAATTATCCACTTTACAAGCATTCTCCATCTGTGTTGCCATTTTGCATGGAACTTCTGCCTTCAGCAATGCAAGTCACGAGAAAAACCAACAGTTATCTCAGTGCAGTTCACTGAAAATGCTACTTGAGGAGGATGTTGATTTCTTTTTCAAATCAGTCACAACTGAGAAGGAGACTGGTTGCAAGAATCAGAAAGGACTTCCTCGATCCTATGTGCTGAACCCGCCTTTTTCTCCTATTGCACGCGTATAA 4020 0.4206 MGNRRFTQVATSDDEDEEPPAPAPPPKQQSSVSASEENCSKQQQQQQRKRKRMKLQEEEEEEKEEEKKKRKIKDKQEERSNEEEEPPQEDAKPIGEPVRLSGKGRGRKKHYESFEYDGNQYMLEDPILLTPEDKDQKPYVAIIKDITQSLNGSMMVTGQWFYRPEEAERKGGGSWQSCDTRELFYSFHRDDVPAESVMHKCVVHFVPIHKQLPNRKQHPGFIVQKVYDTVERKLWKLTDKDYEDNKQQEIDELVQKTLQRLGKLLDIEPEEPVADQEDLMKNKRILRKKSISPLDVSKEEETTRQGDQPLKPETPWSCVNNASEHYRILVDFNALTGDTHRDKCLEKLLQSVQFMFNSDDSIKKEEKGNDNSGAANNGSNNKSLESANECEDKVQKSSKPFVWPDDAVPAVVALEKASHDTLSSDYQKYNQKLRQLVFNLKNNAILARRLLNGELEPSIILNMTPNELKEGLTAEETTKKEPDESQHMQMTGARCHRCTEGKVGLRDIIHAGHGDRYQLECTACGHSWFASRDEVSELTIDASDSKRSVGTAPWATAKFEDVEKKLIVAKDPASWGSPFLQFTSPRSTLSNKKPLNGRSPLYSGSLDSSMGQELELDLDDKSSVGLSPNTVLPPHQYCVNVKKRSKKGKPTGKDDFFTLKEGFAGIKFARFRSSSCKSHLSRPHELEGNTETRRSSMYQSSEEVKSIKKMGTMVEGRRKIEISRRSDTSFVGSIVDSLCGSDDEGSGLRSSEISRSRTCKAPDSPNSFIEICINSDVKNKNSATVQGRESINLKSRSDKVSDSVINGNYHVEKDMVHWLQKSLSAKAGISRMPSPLGSDCSSRSSPKVQVTHCRKRLNHFTKSKSLRSPVSKIQENSEIKSNGIANIARHRTYQKSLLNDLSNKGKHSDIISEFISREIQYSGIASSPVHLHGNLKMENKHGVLFFEFKVKCPEDVFVAKTWRTGNAFNWVYTFHSIDNRKKSNANGLGSHDFDKDSSIVAQMLVSCNLGSELEDKVFDNSMVTEFVLYDFTHSRQSVSREKKSFCELDGSKTPKASHVGLKEETLGLDGNHVVKNKLQDKPLSSSVEFDDLNSYPYLSTECYPNLEIAAIVLQIPFSKRESLKYKRGERKSAKECSNRSDLSAVKDRKSLHYDQIQEQVKVVIPTGNHGLPNAESQAPSSLLDRLRHGGGCDCGGWDMACPLILLGNPTIQFAEDCSLMEEHQPLELFVQGAKGSSPTFSMTRIEEGHYAVDFHAQLSTLQAFSICVAILHGTSAFSNASHEKNQQLSQCSSLKMLLEEDVDFFFKSVTTEKETGCKNQKGLPRSYVLNPPFSPIARV 1339
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma05g02033 1339 Coils Coil 39 85 - -
Gma05g02033 1339 MobiDBLite consensus disorder prediction 50 92 - -
Gma05g02033 1339 Gene3D - 29 227 IPR043151 -
Gma05g02033 1339 MobiDBLite consensus disorder prediction 371 385 - -
Gma05g02033 1339 Gene3D - 322 470 IPR036575 GO:0006351
Gma05g02033 1339 PANTHER DOMAIN PROTEIN, PUTATIVE (DUF3527)-RELATED 614 1339 - -
Gma05g02033 1339 MobiDBLite consensus disorder prediction 1 107 - -
Gma05g02033 1339 MobiDBLite consensus disorder prediction 586 608 - -
Gma05g02033 1339 MobiDBLite consensus disorder prediction 28 42 - -
Gma05g02033 1339 MobiDBLite consensus disorder prediction 679 702 - -
Gma05g02033 1339 SMART mid_6 338 478 IPR003618 GO:0006351
Gma05g02033 1339 Pfam Domain of unknown function (DUF3527) 928 1273 IPR021916 -
Gma05g02033 1339 SUPERFAMILY Elongation factor TFIIS domain 2 335 469 IPR036575 GO:0006351
Gma05g02033 1339 MobiDBLite consensus disorder prediction 363 391 - -
Gma05g02033 1339 ProSiteProfiles BAH domain profile. 119 238 IPR001025 GO:0003682
Gma05g02033 1339 PANTHER EXPRESSED PROTEIN 614 1339 - -
Gma05g02033 1339 ProSiteProfiles TFIIS central domain profile. 340 496 IPR003618 GO:0006351
Gma05g02033 1339 SMART BAH_4 119 238 IPR001025 GO:0003682
Gma05g02033 1339 MobiDBLite consensus disorder prediction 295 316 - -
Gma05g02033 1339 Pfam BAH domain 120 236 IPR001025 GO:0003682
Gma05g02033 1339 Pfam Transcription factor S-II (TFIIS), central domain 336 487 IPR003618 GO:0006351
Gma05g02033 1339 CDD BAH_plant_3 101 247 - -
Gma05g02033 1339 MobiDBLite consensus disorder prediction 741 762 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma05g02033 Gma-Chr5 41610600 41623070 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma05g02033 - - cam:101501082 1748.79
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma05g02033 05 41610600 41623070 Gma05g02033 05 41610600 41623070 ECH
Gma05g02033 05 41610600 41623070 Gma08g00138 08 1165344 1168716 GST
Gma01g02204 01 57276027 57278370 Gma05g02033 05 41610600 41623070 PCT
Gma11g00213 11 1691159 1693714 Gma05g02033 05 41610600 41623070 PCT