LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Gma05g02032	ATGAATTACCTTTTGGCATATTACCGGTGCATTATTGGTATAGTTTCTGATTCTCTTTTTCAATTCCTTTCTCTTTCAGGTGATTTTTTCTCCACGATAAAGTTGCGATTTCGCCGGTGTCGTTTTGCCGCAAGATGGTGTCGTTTTCGGGAATATAAAATCAGGGTTGAAGTTCTTTCTTCAGCATTGAATCTTTGGTTACATAGGGATGTATCTGTTAAACGCAAATCTTTGAATACTGTTCGGTTCCCAACAACTGAGTTTCTTGGTGGTGGAAGGATTGTGGTTTCTCTGGCTTTGCCTAAATCTGATAAGCAAGATAGGTTTGTGTTTTCATCAATTAAGGCCTTGGCTGTGGAGTTAACAAGAGAAGCACATGCTTATAGGGAAGAGAAATTGCCCAACAGGGATACCAAGATTGATCGTGGATTTGATCAAAGGCCTGATTCGTGGCCTCCTGCTAATAGGGCAGATAAACCGTCGCTTCGGAATCCACTACTCCGTCATGAGAGGATGGGATGTGGTTGGTTGGGTGCTATATTTGAGTGGGAGGGTGTTCTAATTGAAGACAACCCTGATTTAGAGAAGCAGGCTTGGCTGGCACTCTCTCAGGAAGAAGGCAAACCCTCTCCTCCTGCTTTTATCCTCAAGAGAATAGAGGGCATGAAGAATGAACAGGCGATTTCAGAAGTGCTGTGTTGGTCTAGGGATCCGGCACAGTTGAGAAGAATGGCTAATAGAAAGGAAGAAATCTACCAATCTTTGCAGGGTGGGATATATAGGTTCTTGTCTGGATCCAAGGAGTTTGTTAGTGTTTTGATGCATTATAAGATACCAATGGCATTGGTTTCCACGCGGCCTAGGAAGGCTCTTGAGTCTGCTATAGGGGAGATTGGGATTGAGGACACTTTCAGTGTTATTGTAGCAGCAGAGGATGTTCATAGGGGAAAGCCTGATCCAGAAATGTTTGTGTATGCTGCACAGCTTTTGAACTTCATACCTGAGAGGTGCATTGTGTTTGGTAACTCCAATCTAACAGTGGAGGCTGCACATGAAGCGCGGATGAAGTGTGTGGCTGTTGCTAGCAAGCATCCTGTATATGAGCTTGGGGCTGCAGACTTGGTTGTCAGGCGCCTAGATGAGCTTTCAGTGGTTGATTTGAAGAATCTTGCAGACATTGAAATGACTGAATTTGGGTCTGTGGAGCCTGAGATGGAGCTGGAGGTGGAAAAAGATTATGGCTCATCATCAGTTGATGACAATTTCTGGGAGCTTACGAGAAAAGGACCCTTGTCCGTCCAGTCCTTATTCTCTTTTCTCCTCCCTCCCTCACGCAACCGCCAATTCCTGAACCCTAAGCTAGCGCCATGGCTGTCGTTTCGCGAAGCTCCTCCACCGCAGAGGATTGTTGGTGGCCGTAGAGTGATTGTTGCTGCGAGCCCTCCCACCGAAGACGCTGTAGTTGCCACTGACCCTCTCACGAAGCAGGATCTCGTCGATTATCTTGCCTCCGGTTGCAAGCCCAAGGATAAATGGAGAATAGGTACTGAACATGAGAAGTTTGGTTTTGAGATTGGAAGCTTGCGTCCTATGAAGTATGACCAAATAGCAGAATTGCTGAATGGCATTGCTGAGAGGTTTGACTGGGATAAAGTAATGGAAGGTGATAAAATTATTGGACTCAAACAGGGGAAGCAGAGCATATCATTGGAGCCTGGTGGTCAGTTTGAACTTAGTGGAGCTCCTCTTGAAACCTTGCATCAGACTTGTGCTGAAGTTAATTCCCACCTTTATCAGGTTAAAGCTGTTGCTGAGGAAATGGGAATTGGATTTTTGGGGATTGGTTTCCAGCCAAAGTGGGGAATCAAAGACATACCTATAATGCCAAAGGGAAGATACGACATCATGAGGAACTACATGCCTAAAGTTGGCTCTCTTGGGCTTGACATGATGTTCAGGACATGCACTGTGCAGGTCAATCTGGACTTTAGTTCTGAAGCTGACATGATCAAGAAATTTCGTGCAGGCCTTGCTTTGCAGCCGATAGCAACGGCTCTTTTTGCAAATTCACCCTTTAAAGAGGGAAAGCCAAATGGTTTTGTCAGTATGAGAAGCCATATTTGGACTGATACTGATAAGGACCGCACAGGCATGCTGCCTTTTGTTTTTGATGACTCTTTTGGGTTTGAGCAATATGTTGATTATGCTCTTGATGTTCCTATGTATTTTGTCTATCGGAAAAACAGATATATCGACTGCACTGGAAAGACCTTCAGGGACTTTTTGGCTGGAAGACTTCCTTGTATTCCTGGTGAATTACCAACTCTCAATGATTGGGAAAATCACTTGACAACTATATTTCCTGAGGTCAGGCTGAAGAGGTATTTGGAGATGAGAGGTGCTGATGGAGGGCCTTGGAGAAGATTGTGTGCTTTACCAGCATTTTGGGTAGGGTTATTGTACGATGAACTTTCTCTAAAAAGTGTTTTGGATATGACAGCTGATTGGACTCCAGAAGAAAGACAAATGTTAAGGAATAAGGTTCCTGTAACTGGTCTGAAGACACCATTCCGAGACGGTTTGCTGAAGCATGTTGCTGAAGATGTTCTAAAGTTGGCAAAGGTAAAAGGTGTCATTATTTTTGTTATTGCTGTTATTTTCGATGTTGCTAAGGGCATTGGGATGCATCCACAGGATGGCTTGGAGAGAAGAGGCTTCAAGGAATCGGGATTTTTGAATGAGGTTGCCGAGGTGGTTAGAACAGGTGTCACTCCAGCTGAGAGGCTTTTGGAATTGTATCATGGAAAGTGGGAGCAATCCGTAGATCATGTGTTTGAGGAATTGCTTTATTAA	2853	0.4434	MNYLLAYYRCIIGIVSDSLFQFLSLSGDFFSTIKLRFRRCRFAARWCRFREYKIRVEVLSSALNLWLHRDVSVKRKSLNTVRFPTTEFLGGGRIVVSLALPKSDKQDRFVFSSIKALAVELTREAHAYREEKLPNRDTKIDRGFDQRPDSWPPANRADKPSLRNPLLRHERMGCGWLGAIFEWEGVLIEDNPDLEKQAWLALSQEEGKPSPPAFILKRIEGMKNEQAISEVLCWSRDPAQLRRMANRKEEIYQSLQGGIYRFLSGSKEFVSVLMHYKIPMALVSTRPRKALESAIGEIGIEDTFSVIVAAEDVHRGKPDPEMFVYAAQLLNFIPERCIVFGNSNLTVEAAHEARMKCVAVASKHPVYELGAADLVVRRLDELSVVDLKNLADIEMTEFGSVEPEMELEVEKDYGSSSVDDNFWELTRKGPLSVQSLFSFLLPPSRNRQFLNPKLAPWLSFREAPPPQRIVGGRRVIVAASPPTEDAVVATDPLTKQDLVDYLASGCKPKDKWRIGTEHEKFGFEIGSLRPMKYDQIAELLNGIAERFDWDKVMEGDKIIGLKQGKQSISLEPGGQFELSGAPLETLHQTCAEVNSHLYQVKAVAEEMGIGFLGIGFQPKWGIKDIPIMPKGRYDIMRNYMPKVGSLGLDMMFRTCTVQVNLDFSSEADMIKKFRAGLALQPIATALFANSPFKEGKPNGFVSMRSHIWTDTDKDRTGMLPFVFDDSFGFEQYVDYALDVPMYFVYRKNRYIDCTGKTFRDFLAGRLPCIPGELPTLNDWENHLTTIFPEVRLKRYLEMRGADGGPWRRLCALPAFWVGLLYDELSLKSVLDMTADWTPEERQMLRNKVPVTGLKTPFRDGLLKHVAEDVLKLAKVKGVIIFVIAVIFDVAKGIGMHPQDGLERRGFKESGFLNEVAEVVRTGVTPAERLLELYHGKWEQSVDHVFEELLY	950

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Gma05g02032	950	PANTHER	GLUTAMATE--CYSTEINE LIGASE	888	950	-	-
	Gma05g02032	950	TIGRFAM	HAD-SF-IA-v3: HAD hydrolase, family IA, variant 3	295	360	IPR006439	-
	Gma05g02032	950	Pfam	Haloacid dehalogenase-like hydrolase	196	360	IPR041492	-
	Gma05g02032	950	Gene3D	Putative phosphatase; domain 2	189	262	IPR023198	-
	Gma05g02032	950	SUPERFAMILY	HAD-like	179	382	IPR036412	-
	Gma05g02032	950	Gene3D	-	179	377	IPR023214	-
	Gma05g02032	950	PANTHER	GLUTAMATE--CYSTEINE LIGASE, CHLOROPLASTIC	472	874	IPR035434	GO:0004357\|GO:0006750
	Gma05g02032	950	SUPERFAMILY	Glutamine synthetase/guanido kinase	504	948	IPR014746	GO:0003824
	Gma05g02032	950	Gene3D	-	478	950	-	-
	Gma05g02032	950	TIGRFAM	glu_cys_lig_pln: glutamate--cysteine ligase	492	950	IPR011556	GO:0004357\|GO:0006750
	Gma05g02032	950	PANTHER	GLUTAMATE--CYSTEINE LIGASE, CHLOROPLASTIC	888	950	IPR035434	GO:0004357\|GO:0006750
	Gma05g02032	950	PANTHER	GLUTAMATE--CYSTEINE LIGASE	472	874	-	-
	Gma05g02032	950	CDD	HAD_BPGM-like	239	362	-	-
	Gma05g02032	950	Pfam	Glutamate-cysteine ligase family 2(GCS2)	546	835	IPR006336	GO:0004357\|GO:0042398
	Gma05g02032	950	MobiDBLite	consensus disorder prediction	138	162	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Gma05g02032	Gma-Chr5	41594169	41609671	Dispersed/Wgd

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Gma05g02032	K01919		-	gmx:547545	942.954

Event-related genes

Select	Gene_1	Chr_1	Start_1	End_1	Gene_2	Chr_2	Start_2	End_2	Event_name
	Gma05g02032	05	41594169	41609671	Gma05g02032	05	41594169	41609671	ECH