Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma05g01988 ATGACCATGCATCGCGAGTCTTGGGCTTTTGTCTTCGGCGTTATGGGCAACATCATCTCCTTTGGAGTGTTCCTTGCTCCATTGCCAACCTTTTACCAAATCTACAAGAAGAAATCCACTGAAGGGTTCCAGTCACTTCCTTATGTTGTTGCACTGTTCAGTGCAATGCTTTGGATTTACTATGCTTTCGTCAAAAGGGAAGCTGCCCTCCTTCTCATTACCATTAACACATTTGGAATTGTTGTGGAGTCAATTTACCTTGCAATCTTCCTACTTTATGCCCCAAGGAAGCCTAGGCTTACAACCATCAAGCTTCTTCTCTTACTGAATGTGTTTGGGTTTGGAGCCATGCTTCTATCAACTCTCTACCTGTCAAAGGGAGCAAAGCGTCTTGCTATCATAGGATGGATTTGCCTTGTTTTCAACATCAGTGTCTTTGCTGCGCCTCTCTTCATTATTAGGCGTGTCATAAAGACGAGGAGCGTGGAATACATGCCATTTACTTTGTCAATGTTTTTAACCATCAATGCTGTTATGTGGTTCTTCTATGGCCTTCTCCTCAGGGATTATTACGTTGCTCTTCCAAACACACTTGGGTTTGTCTTCGGCATAATTCAGATGGGGATGTATTTGATGTACAGAAACGCCACCCCAGTGGCACTAGAGGAGCCAGTGAAGGCTCAAGAATTGAATGGCCACATCATTGACGTTGGGAAGATGGGAACAATGGAACCGAATCACGCAGCTACTGCTGGTGCTGTTGGCAAAGTTTGA 774 0.4444 MTMHRESWAFVFGVMGNIISFGVFLAPLPTFYQIYKKKSTEGFQSLPYVVALFSAMLWIYYAFVKREAALLLITINTFGIVVESIYLAIFLLYAPRKPRLTTIKLLLLLNVFGFGAMLLSTLYLSKGAKRLAIIGWICLVFNISVFAAPLFIIRRVIKTRSVEYMPFTLSMFLTINAVMWFFYGLLLRDYYVALPNTLGFVFGIIQMGMYLMYRNATPVALEEPVKAQELNGHIIDVGKMGTMEPNHAATAGAVGKV 257
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma05g01988 257 Gene3D - 11 97 - -
Gma05g01988 257 PANTHER BIDIRECTIONAL SUGAR TRANSPORTER SWEET 4 254 - -
Gma05g01988 257 PANTHER RAG1-ACTIVATING PROTEIN 1 4 254 - -
Gma05g01988 257 Pfam Sugar efflux transporter for intercellular exchange 11 97 IPR004316 GO:0016021
Gma05g01988 257 Pfam Sugar efflux transporter for intercellular exchange 133 216 IPR004316 GO:0016021
Gma05g01988 257 Gene3D - 129 220 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma05g01988 Gma-Chr5 41238365 41241300 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma05g01988 1 245 Miscellaneous Gene Families AT5G50800 56.911 1.40e-97 286
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma05g01988 K15382 - gmx:100810946 495.352
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma05g01988 05 41238365 41241300 Gma05g01988 05 41238365 41241300 ECH
Gma05g01988 05 41238365 41241300 Gma08g00094 08 806392 808380 GST