Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma05g01981 ATGGCAGAGATTCAGCCGCCGGAGGGCCAAATAAACGGTGCCGCGGGAACCCTAATTCTTCACTCCTCGGAGCCTTCCATCGGATCGAAGCGGCAGCGGCGGCCGAGCGTCCGATTGGGCGACATCGGCGGCGACCAGCCCTACGATCCCCACGCCCGCCGCAACCCGAAGCCGTGGAAACTCGCCTTCGACAGTcaccaccaccaccaccaccaccaccGCAGCAAGGACAAGGACCCAGGTAAACCCTCCAAGACTCGTCCTTTAACGAACCTGAGCGAGTTTAACGAAACCCTAGAACCTTGCAACGACCGAGAACCGGGGAACATCGACACCGTCGCAATTGGCAGCTGGAAGGTCAAGGAGTCCAAGAAGAGAGGCTCCGTCGCCACCAAGAGGGTCAGATCGAATTGGGTTTTGCGAATCGACGATGGCGGTGGCGACAACGGTGGCGACGAGGGAGAGGGAGAGAAGTATAATAACGGGGAAGAAGATGGGGATGACGATGATGGGTATCGGGAATTTGAGGTAGAGAATTCGGAGAGCCCTTTGAAGGAGCAAAGCCCTATTCATAGTATGGAGAATTTGGGGGTTGATGGGCATAGGAGGGTTTTTAAGGGTAGGGAAAGGGAACAGCATCATGATGGGGTTGAGCTATCTGCACCGTCTGATACTGATGTGAGGGATTGGAAGTGTGGGGATAGGAACAATGAGAATGGTGGTGGGAGGGTTAGGGGTGTTGAAGATGGGGTTAGGGTTTGGCTTAATGGATTGGGGTTAGGTCGCTATGCGCCTGTGTTTGAAGTGCATGAGGTGGATGATGAGGTTTTGCCCATGTTGACTCTAGAGGATCTCAAGGATATGGGGATTAGTGCTGTTGGGTCAAGGAGAAAAATGTACACTGCCATTCAGAAGCTTGGAAAGGGCTTCTCCTGA 936 0.5246 MAEIQPPEGQINGAAGTLILHSSEPSIGSKRQRRPSVRLGDIGGDQPYDPHARRNPKPWKLAFDSHHHHHHHHRSKDKDPGKPSKTRPLTNLSEFNETLEPCNDREPGNIDTVAIGSWKVKESKKRGSVATKRVRSNWVLRIDDGGGDNGGDEGEGEKYNNGEEDGDDDDGYREFEVENSESPLKEQSPIHSMENLGVDGHRRVFKGREREQHHDGVELSAPSDTDVRDWKCGDRNNENGGGRVRGVEDGVRVWLNGLGLGRYAPVFEVHEVDDEVLPMLTLEDLKDMGISAVGSRRKMYTAIQKLGKGFS 311
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma05g01981 311 SUPERFAMILY SAM/Pointed domain 249 306 IPR013761 -
Gma05g01981 311 MobiDBLite consensus disorder prediction 208 243 - -
Gma05g01981 311 Pfam SAM domain (Sterile alpha motif) 251 306 IPR001660 GO:0005515
Gma05g01981 311 MobiDBLite consensus disorder prediction 158 173 - -
Gma05g01981 311 PANTHER SCP160 22 311 - -
Gma05g01981 311 PANTHER - 22 311 - -
Gma05g01981 311 MobiDBLite consensus disorder prediction 16 30 - -
Gma05g01981 311 MobiDBLite consensus disorder prediction 141 173 - -
Gma05g01981 311 ProSiteProfiles SAM domain profile. 246 309 IPR001660 GO:0005515
Gma05g01981 311 MobiDBLite consensus disorder prediction 208 242 - -
Gma05g01981 311 Gene3D - 247 306 IPR013761 -
Gma05g01981 311 MobiDBLite consensus disorder prediction 1 110 - -
Gma05g01981 311 MobiDBLite consensus disorder prediction 179 198 - -
Gma05g01981 311 CDD SAM_superfamily 251 305 - -
Gma05g01981 311 SMART SAM_4 243 309 IPR001660 GO:0005515
Gma05g01981 311 MobiDBLite consensus disorder prediction 63 78 - -
Gma05g01981 311 MobiDBLite consensus disorder prediction 47 62 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma05g01981 Gma-Chr5 41160928 41162076 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma05g01981 - - gmx:100789887 561.222
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma05g01981 05 41160928 41162076 Gma05g01981 05 41160928 41162076 ECH