Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma05g01971 ATGGGAAAGGAGAGCCAAACGTCCGCTATGGAAATCGACGCTCCAAAATCGATGAATTCCGATCTGATCGTTCCAAAATTCTCCATCAACGTGCTGCAGCTCTTAAAATCTGCGCAAATGCAGCATGGCTTGCGTCATGGAGACTACACTCGCTATAGGAGGTATTGCACAGCTCGTTTGAGGAGGTTATATAAATCGTTGAAGTTTACCCATGGTCGTGGCAAATATGCAAAAAGGGCCTTAACTGAGTCTACTGTCACCGAAGTAAGGTTTCTTCATGTAATTCTCTATACAGCAGAGAGAGCTTGGAGTCATGCCATGGAGAAAAGGCAGCTTCCAAATGGCCCAAATGCACGTCAGCGCATATATTTGATTGGTAGGTTGCGGAAAGCAGTAAAATGGGCTACTTTGTTTTCACAATTGTGTGCGGTCAAAGCTGATTCTAGAACATCCTTGGAAGCTGAGGCTTATGAATCCTATATGAAAGGGAGTTTGTTGTTTGAGCAAGATCAGAATTGGGACGTGGCTTTAAAGAACTTCAAAAGTGCTAGggctgtatatgaggaattggggaaatatggagatctggataaccaagttttgtgtcgtgagcgagttgaggaactagaaCCTAGTATCCGGTACTGCCTTCACAAAATTGGCCAGTCAGATTTACAGGCCTCTGAACTTTTGCAAATCAGTGATGTGGAAGGTCCCGCATTAGACCTTTTTAAAGCTAAATTAGAGGCTGCCATGGCTGAGGCAAGATCTCAACAAGCTGCTTCCATGACAGAATTCCTTTGGCTTGGCCACAGATTTCCAATATCAAATGCCAAAACAAGGGTTTCCATCCTGAAAGCTCAGGAGCTGGAGAAAGATATACATGGTCCCTTGGCAGACTCAATTCCAGCAGACAAAAGACTTGTTATTTTTGACAAAATCTTTTCTGCATATCATGAAGCCAGAGGCTATATTCGGGCTGATTTGGCCACTACAGGAAGTACAGAAAGCGTGAAAGATGATTTGAATGGTCTTGATAAGGCTGTCAGTGCTGTCCTAGGAGAAAGAACCATTGATCGGAACCTCTTGTTGGTTAAGGTTGCAAAAAGCAAACTTGCAAAGCGTCATGATGATAAAAATGAAAAACTCACCAAACCTGAAGAGCTTGTTCGCTTATATGATCTCTTGCTGCAGAATACAGGTGATCTATCTGATTTAGTCAGTTCTGGAAGGGATAAAAAGCCAGAAGAAGTTATCTTTGCTGAAGTGTGTTCATACAAAAGTTTGGCTTTTCGAGCCCAAAGGTGCTTTTATGTTGCAAAGTCATACAGTGTGGCTGGAAAGAGGGCTGAAGCATATGCATTGTACTGTCGTGCTCGCAATTTGGCAGATGATGCCTTAAAAAAGTTCCAAATGTTGGATGGTGATAATAAGACTATGATGAAAGAGTTGGAGGATTTGTGCAATGAGTGCCGATCTAACAGTTGTATAGAGCATGCATTGGGGATCATGGAGGAGAAGAAGACTCAAGAAAATCTATCTGAAAGGGTCTCCAATATATCATTGACTGGAACTGAGCGGTTGGAGAAGTTCCTTCTTGAGAAACTAGATGTTTATGAGTCTGCTGTGGGTGATTCAAATGTGAAGTGTACACCACGCATTGCAGGCTTCCCTCCGGCTTTCCAGGCAATTTCCCGTAATCCTATTGTGCTGGATCTGGCTTATAACATGATTGAATTCCCACCTATTGAAAACAGGATGAAGAAGGATAGAAAAGCCAAGGGCGGCTTTATCAGTAGAATATTTGGATGA 1812 0.4084 MGKESQTSAMEIDAPKSMNSDLIVPKFSINVLQLLKSAQMQHGLRHGDYTRYRRYCTARLRRLYKSLKFTHGRGKYAKRALTESTVTEVRFLHVILYTAERAWSHAMEKRQLPNGPNARQRIYLIGRLRKAVKWATLFSQLCAVKADSRTSLEAEAYESYMKGSLLFEQDQNWDVALKNFKSARAVYEELGKYGDLDNQVLCRERVEELEPSIRYCLHKIGQSDLQASELLQISDVEGPALDLFKAKLEAAMAEARSQQAASMTEFLWLGHRFPISNAKTRVSILKAQELEKDIHGPLADSIPADKRLVIFDKIFSAYHEARGYIRADLATTGSTESVKDDLNGLDKAVSAVLGERTIDRNLLLVKVAKSKLAKRHDDKNEKLTKPEELVRLYDLLLQNTGDLSDLVSSGRDKKPEEVIFAEVCSYKSLAFRAQRCFYVAKSYSVAGKRAEAYALYCRARNLADDALKKFQMLDGDNKTMMKELEDLCNECRSNSCIEHALGIMEEKKTQENLSERVSNISLTGTERLEKFLLEKLDVYESAVGDSNVKCTPRIAGFPPAFQAISRNPIVLDLAYNMIEFPPIENRMKKDRKAKGGFISRIFG 603
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma05g01971 603 PIRSF SRP68 27 596 IPR026258 GO:0005047|GO:0005786|GO:0006614|GO:0008312|GO:0030942
Gma05g01971 603 CDD SRP68-RBD 30 218 IPR034652 GO:0003723
Gma05g01971 603 PANTHER SIGNAL RECOGNITION PARTICLE 68 KDA PROTEIN 24 601 IPR026258 GO:0005047|GO:0005786|GO:0006614|GO:0008312|GO:0030942
Gma05g01971 603 Pfam RNA-binding signal recognition particle 68 44 578 IPR026258 GO:0005047|GO:0005786|GO:0006614|GO:0008312|GO:0030942
Gma05g01971 603 Gene3D - 26 222 IPR038253 GO:0003723
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma05g01971 Gma-Chr5 41031301 41038738 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma05g01971 K03107 - gmx:100816486 1162.52
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma05g01971 05 41031301 41038738 Gma05g01971 05 41031301 41038738 ECH
Gma05g01971 05 41031301 41038738 Gma08g00074 08 630026 639776 GST