Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma05g01970 ATGGCGTTCTCATCGTCCCTATGGTCTTCCCTCTTCGTTGCAAACCCAAACAGAACCGCCATTTCCACTCGATTCTCTCACAAACCGCCCAAACTCCCTCTCTCGCCGGCGTTCGCCATCCCGCCGCTCTCCACGGCCACTGCGGCGGACGTCTCGGGCGCCATCGACGGGACTACGATCGCGGTGGTGAGCGGGGGATTCGTGGCGGCACTGGCGGCGGTGCTGTCGCTGACGGACCCGGAGCGGCGGCGGCAGTTACAGGCGGAGGAGGTGGGCGGCGGCGACAAGGAGGTGGTGAGGGAGTACTTCAACAACTCCGGGTTCCAGCGCTGGAAGAAGATCTACGGCGACACCGACGAGGTGAACCGGGTTCAGCGCGACATTAGGTTGGGCCACGCCAAGACCGTGGAGAACACGCTGAGCATGTTGAAGGACGAAGGTTCCCTTCAGGGCGTTACGGTTTGCGACGCTGGGTGCGGTACCGGTTCTCTCTCTATTCCTCTTGCCAAAGAGGGCGCTGTTGTGTTCGCCAGTGATATCTCCGCCGCTATGGTTGCCGAGGCTGAGAAACAGGCAAAAGAACAGCTTGCAACCAGTGAAGATGGATCTGTGCCCGTGATGCCTAAGTTTGTAGTGAAGGATTTAGAGAGCTTGGATGGCAAGTATGATACGGTGGTCTGCCTCGATGTCTTGATTCATTACCCACAACATAAAGCCGATGGGATGATTGCACACCTTGCATCATTGGCCAACAACCGATTGATTCTGAGTTTTGCCCCAAAGACGTTTTATTATGATCTGCTAAAGAGGGTTGGAGAGTTGTTCCCTGGTCCTTCAAAGGCAACAAGAGCATATCTTCACTCTGAGGCAGATGTAGAGAGAGCATTGCAAAAGGTTGGCTGGACCATAAGGAAGAGAGGCTTAACCACTACCCAATTTTACTTTGCTAGGCTTATTGAGGCTGTTCCTATGTAG 975 0.5508 MAFSSSLWSSLFVANPNRTAISTRFSHKPPKLPLSPAFAIPPLSTATAADVSGAIDGTTIAVVSGGFVAALAAVLSLTDPERRRQLQAEEVGGGDKEVVREYFNNSGFQRWKKIYGDTDEVNRVQRDIRLGHAKTVENTLSMLKDEGSLQGVTVCDAGCGTGSLSIPLAKEGAVVFASDISAAMVAEAEKQAKEQLATSEDGSVPVMPKFVVKDLESLDGKYDTVVCLDVLIHYPQHKADGMIAHLASLANNRLILSFAPKTFYYDLLKRVGELFPGPSKATRAYLHSEADVERALQKVGWTIRKRGLTTTQFYFARLIEAVPM 324
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma05g01970 324 Gene3D Vaccinia Virus protein VP39 92 324 IPR029063 -
Gma05g01970 324 PANTHER METHYLTRANSFERASE 59 321 - -
Gma05g01970 324 TIGRFAM BchM-ChlM: magnesium protoporphyrin O-methyltransferase 95 320 IPR010251 GO:0015995|GO:0046406
Gma05g01970 324 CDD AdoMet_MTases 153 258 - -
Gma05g01970 324 PANTHER MAGNESIUM PROTOPORPHYRIN IX METHYLTRANSFERASE, CHLOROPLASTIC-RELATED 59 321 - -
Gma05g01970 324 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 90 306 IPR029063 -
Gma05g01970 324 Pfam Magnesium-protoporphyrin IX methyltransferase C-terminus 227 322 IPR010940 GO:0015995|GO:0046406
Gma05g01970 324 ProSiteProfiles Magnesium protoporphyrin IX methyltransferase (EC 2.1.1.11) family profile. 2 323 IPR010251 GO:0015995|GO:0046406
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma05g01970 Gma-Chr5 41026934 41029318 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma05g01970 K03428 - gmx:100817017 629.017
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma05g01970 05 41026934 41029318 Gma05g01970 05 41026934 41029318 ECH
Gma05g01970 05 41026934 41029318 Gma08g00073 08 626821 628928 GST