Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma05g01965 ATGGGTGTGTCGAAATTGGGTTTTTTGGGGCTTCTTTTTGCTGATTTTCTCTTTGCAGTTGGAGCTGTGGAGCTGGGCAGGAACCAACCCACTGAAAGAATTTCAGGTAGTGCTGGTGATGTATTGGAAGATGATCCAGTGGGAAGGTTGAAGGTTTTTGTTTATGAACTTCCAAGTAAATATAATAAGAAAATTCTGCAAAAGGATCCAAGATGTCTCAACCATATGTTTGCTGCTGAAATCTTTATGCACCGGTTTCTCTTATCCAGCCCTGTCCGAACCCTTAATCCTGAAGAAGCTGATTGGTTTTATACCCCTGTATACACCACTTGTGACTTGACACCAAATGGCCTCCCTTTACCCTTTAAGTCACCACGAATGATGAGAAGTGCTATACAGCTTATTTCTTCAAACTGGCCTTATTGGAACCGGACAGAGGGGGCTGATCACTTCTTTGTGGTTCCTCATGACTTTGGGGCATGTTTCCATTACCAGGAAGAGAAGGCAATTGAAAGAGGGATTCTTACACTACTACGGCGTGCTACCTTGGTTCAAACATTTGGACAGAGAAATCATGTGTGCTTGAAAGAGGGCTCGATTACCATCCCTCCGTATGCTCCACCACAGAAAATGCATACCCACCTAATTCCTGACAAGACTCCCAGGTCCATTTTTGTATACTTCCGAGGACTCTTTTATGATGTTGGCAATGACCCTGAAGGTGGTTACTATGCAAGAGGCGCAAGAGCAGCAGTGTGGGAGAACTTTAAGGACAATCTGCTGTTTGACATCTCCACTGAGCATCCAACCACTTACTACGAGGACATGCAAAGAGCCGTGTTTTGTCTGTGCCCACTTGGATGGGCCCCTTGGAGCCCAAGATTGGTAGAAGCTGTGATATTTGGTTGCATCCCTGTTATTATTGCAGATGACATTGTTCTTCCATTCGCTGATGCAATCCCATGGGAAGAGATAGGGGTGTTTGTTGATGAGGAGGATGTTCCCAAGTTGGATACAATACTCACATCTATCCCACCAGAAGTCATATTAAGGAAACAGAGATTGCTTGCTAACCCTTCCATGAAGCAAGCAATGCTTTTCCCACAGCCTGCTCAACCCGGAGACGCGTTCCATCAAGTTTTAAATGGACTTGCACGTAAGCTGCCTCACGACAACACCGTGTTCTTGAAACCAGGGGAGAAGATCTTGAATTGGACTGCTGGACCTGTGGGAGACCTTAAACCTTGGTAA 1251 0.4532 MGVSKLGFLGLLFADFLFAVGAVELGRNQPTERISGSAGDVLEDDPVGRLKVFVYELPSKYNKKILQKDPRCLNHMFAAEIFMHRFLLSSPVRTLNPEEADWFYTPVYTTCDLTPNGLPLPFKSPRMMRSAIQLISSNWPYWNRTEGADHFFVVPHDFGACFHYQEEKAIERGILTLLRRATLVQTFGQRNHVCLKEGSITIPPYAPPQKMHTHLIPDKTPRSIFVYFRGLFYDVGNDPEGGYYARGARAAVWENFKDNLLFDISTEHPTTYYEDMQRAVFCLCPLGWAPWSPRLVEAVIFGCIPVIIADDIVLPFADAIPWEEIGVFVDEEDVPKLDTILTSIPPEVILRKQRLLANPSMKQAMLFPQPAQPGDAFHQVLNGLARKLPHDNTVFLKPGEKILNWTAGPVGDLKPW 416
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma05g01965 416 PANTHER EXOSTOSIN HEPARAN SULFATE GLYCOSYLTRANSFERASE -RELATED 6 410 IPR004263 GO:0006486|GO:0016757
Gma05g01965 416 Pfam Exostosin family 49 344 IPR040911 -
Gma05g01965 416 PANTHER IRX10L-LIKE PROTEIN, PUTATIVE-RELATED 6 410 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma05g01965 Gma-Chr5 40967814 40970519 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma05g01965 K20870 - gmx:100812747 850.506
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma05g01965 05 40967814 40970519 Gma05g01965 05 40967814 40970519 ECH
Gma05g01965 05 40967814 40970519 Gma04g01989 04 50325201 50328601 PCT
Gma05g01965 05 40967814 40970519 Gma06g01425 06 13549259 13551785 PCT
Gma04g01955 04 50008583 50013240 Gma05g01965 05 40967814 40970519 PCT
Gma06g01453 06 13831408 13836209 Gma05g01965 05 40967814 40970519 PCT