Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma05g01833 ATGAGCAGGAGTTTGGGAATTCCGGTGAAGCTGCTCCACGAGGCTTCGGGGCACGTGGTGACGGTGGAGCTCAAGAGCGGAGAACTCTACAGAGGCAGCATGATCGAGTGCGAGGACAACTGGAACTGCCAACTCGAGAGCATCACCTACACTGCCAAGGATGGCAAAACATCGCAACTTGAGCATGTTTTTATTCGAGGAAGCAAAGTCAGGTTTATGGTCATCCCAGACATGCTGAAGAATGCGCCTATGTTTAAGCGTTTGGATGCAAGAATCAAGGGCAAGGGTGCATCACTTGGTGTTGGTAGGGGCAGAGCAGTTGCAATGCGAGCAAAGGCTCAAGCTGCTGGGCGTGGAGCTGCACCTGGAAGGGGTGTACCACCAGTGCGGAGATATGAAATTGAAGTAGCTATCTATGTTTTAAATTTCAAACTCAAGCATAAATCCACGTCATGTCGACCACATCCTTGTCATCGTTGTGGAGTAGAGCAGCGAAACCTTGTTAGATTAGGGGGAGGGGTGTTGAGATCCAAGATTAACCTTGTTAGATTAGTGGCGGTGTGCATAAAATTGACCATTGTTCTTCATGACATTGTTTACGCTGCTGTTCCTGCTTCCTCACTGAGTGAAGAAAAAGGACGTTACAAAAGCGCACACGATTTTTCAAGAGCCAAACAGAGTGCCCTAAATTCAAGCGCAACGAGTCAAACAAACAAAGAGAGAAGAAGAAGAAGCAAAATAAAGCCATTGAACATGTCTTCAGCAACCAAGGGTGATAGGAAGACTGCACTTGATGTGGCATCATGGATGTTCAATATAGTCACATCTGTGGGAATAATCCTTGTGAATAAAGCCCTCATGGCTACATATGGTTTCAGCTTTGCTACAACGTTAACTGGTCTGCATTTTGCCACAACAACCTTGCTGACAGTCTTTCTTAAGTGGCTGGGATATGTCCAAACCTCTCACCTTCCCTTACCTGATCTCATCAAATTTGTCTTATTTGCAAATTTCTCTATTGTCGGCATGAACGTGAGTTTGATGTGGAATTCTGTCGGTTTCTATCAGATTGCTAAGCTGAGTATGATTCCAGTATCTTGTTTCCTGGAAGTTATCTTGGATAATGTGCGATATTCAAGGGACACAAAACTTAGCATTTCTCTAGTTCTCCTTGGGGTTGCTGTATGTACAGTCACTGACGTGAGTGTCAATGCTAAGGGTTTTATAGCTGCTGCAGTGGCAGTTTGGAGCACCTCACTACAGCAGTATTATGTGCATTTTCTTCAGAGGAAGTACTCTCTTGGATCGTTTAACTTGTTGGGCCACACTGCACCAGTACAGGCAGCAAGTTTACTACTAGTAGGTCCCTTTTTGGACTATTGGCTGACAAACAAACGAGTTGACGCCTACAACTATGGTTTCACATCTACTTTGTTCATCATTATCTCTTGCACCATCGCAGTAGGGACAAACCTCAGCCAGTTCATCTGCATTGGCAGGTTCACGGCTGTATCTTTCCAAGTCCTTGGACACATGAAGACTATTCTGGTACTGGCCTTAGGATTCGTTTTCTTCGGAAAAGAAGGCCTCAATTTACAAGTGATTCTGGGCATGACCATTGCCATAGCGGGAATGATATGGTTTTCAAAACAAATCCGAAAACCCCAACCTATCGTCTCTTGGCTCTTCTTCACCTTCAGTCTTCACTCACGCGCGCCATCTTCTCAGTCGCCACCACTCCACGCCCACGCTGAGAAAAGGAATATGGGTGATCGGCAAGTAGTTGACCAACAACACATGGGTGATCCACAACTGCCATCTTCTCCTCCCTCAAAGGATGATATGGTTTCATGTGTTATGGCTTTGGAGGCTGCTTTGCTTCCCTGTTTGCCAGCCAGAGAACTTCAAGCAATAGACCGTTCTCCCCACCCCTCACATCAAATTGATGTGGATAGGTATGCAAGAGACTTCATGGAGGCTGCCAAGAAGCTTCAGCTTTATTTTATCAGCCTGCAACGTGAGGATAAGCCAACAAAAGTTGAAATGCTTAGAAAGGAGATCGCTCTGATGGAAGAGGAACTTAACATAAAGAATGAGCTGATAAAAAAACAAGAAAATTTAATTCAGGAGTGGAAAAAAGAGTTGAAAGATCAGTTGGACAAACACAAGATTGAGTTGGATAGGGTTTAG 2190 0.4493 MSRSLGIPVKLLHEASGHVVTVELKSGELYRGSMIECEDNWNCQLESITYTAKDGKTSQLEHVFIRGSKVRFMVIPDMLKNAPMFKRLDARIKGKGASLGVGRGRAVAMRAKAQAAGRGAAPGRGVPPVRRYEIEVAIYVLNFKLKHKSTSCRPHPCHRCGVEQRNLVRLGGGVLRSKINLVRLVAVCIKLTIVLHDIVYAAVPASSLSEEKGRYKSAHDFSRAKQSALNSSATSQTNKERRRRSKIKPLNMSSATKGDRKTALDVASWMFNIVTSVGIILVNKALMATYGFSFATTLTGLHFATTTLLTVFLKWLGYVQTSHLPLPDLIKFVLFANFSIVGMNVSLMWNSVGFYQIAKLSMIPVSCFLEVILDNVRYSRDTKLSISLVLLGVAVCTVTDVSVNAKGFIAAAVAVWSTSLQQYYVHFLQRKYSLGSFNLLGHTAPVQAASLLLVGPFLDYWLTNKRVDAYNYGFTSTLFIIISCTIAVGTNLSQFICIGRFTAVSFQVLGHMKTILVLALGFVFFGKEGLNLQVILGMTIAIAGMIWFSKQIRKPQPIVSWLFFTFSLHSRAPSSQSPPLHAHAEKRNMGDRQVVDQQHMGDPQLPSSPPSKDDMVSCVMALEAALLPCLPARELQAIDRSPHPSHQIDVDRYARDFMEAAKKLQLYFISLQREDKPTKVEMLRKEIALMEEELNIKNELIKKQENLIQEWKKELKDQLDKHKIELDRV 729
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma05g01833 729 PANTHER UDP-RHAMNOSE/UDP-GALACTOSE TRANSPORTER 4 258 553 - -
Gma05g01833 729 PANTHER SOLUTE CARRIER FAMILY 35 258 553 - -
Gma05g01833 729 MobiDBLite consensus disorder prediction 221 255 - -
Gma05g01833 729 Gene3D - 3 86 - -
Gma05g01833 729 SUPERFAMILY Sm-like ribonucleoproteins 8 126 IPR010920 -
Gma05g01833 729 SMART Sm3 10 75 IPR001163 -
Gma05g01833 729 Coils Coil 680 721 - -
Gma05g01833 729 Pfam Mediator complex subunit 28 617 715 - -
Gma05g01833 729 Pfam Triose-phosphate Transporter family 274 548 IPR004853 -
Gma05g01833 729 Pfam LSM domain 11 74 IPR001163 -
Gma05g01833 729 CDD Sm_D3 8 77 IPR034099 GO:0000387|GO:0005681
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma05g01833 Gma-Chr5 39846325 39860506 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma05g01833 223 554 Organic Solute Cotransporters AT3G10290 25.287 2.26e-13 70.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma05g01833 - - gmx:100814890 577.015
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma05g01833 05 39846325 39860506 Gma05g01833 05 39846325 39860506 ECH
Gma05g01833 05 39846325 39860506 Gma08g01323 08 11211092 11214539 GST
Gma05g01833 05 39846325 39860506 Gma04g02123 04 51726929 51730946 PCT
Gma05g01833 05 39846325 39860506 Gma06g01291 06 12086145 12096895 PCT
Gma04g02123 04 51726929 51730946 Gma05g01833 05 39846325 39860506 PCT
Gma06g01291 06 12086145 12096895 Gma05g01833 05 39846325 39860506 PCT