Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma05g01717 ATGACCAAACATATTCGTGCGACTCATGCTCCCGTTCATGGACACATTGACGTTAGACCTCTTTTTCACGTTGTTGTTGACATTTTTCACCGCAGCCTCTCTCATCCCTGGCTGGCATTGTTCAGGTATATGTGTGGAAAACAAGGGCAGATGGATGCCATGAAAAGTAGTGCATACCAATCTGATTTAGCTAATGTGCTAGATATTTCGTACCACGCAATCAACAAAATTTTCTTGCGAGATGTACATGCCACAACCATGGGAATACTGGGCATGCTCTCAAGCTATTCATGGGATGCCAAGGTGGTGATAGCGTTAGCAGCAAACTTCAAGGAGTTTTGGCTGGTGGCTCAGCTTCATGCCACCAATCGTCTTGCTAAGTCTTTTCAAACAATTAACAACCTTCTCAAGGCAATGTTGGATGTAACCAATAACGTTGTCCAATTCCATGAGCTTCCCTCTCAGTACATTGACCCTGAGGCACCGGAGATGTTGACTGCCTCCAATCTTATTCCCGGTGCTGTCTATTGGACCATTCGGAGTATAGTGTCCTGTGCATCGCATGTTTTGGACATAACTGGCTTGGGTCAAGGATATTTGACATCAACAACAGAGACTTGGGAGCTTTCGAGTTTGGCCCATAAACTTGATAACATAAATACTCACCTTCGAATGCAACTCACCCTTTGTCCTCAGTATTTAGATGACAACAGAGAGAGGCATTTGAAACACTTCGGCTCCTTTTTGAGAGATCCCCCCAAGATAATTCAAAGGTTCTCAAAGCTATGTTTTGCAGCCAGGATGATTCGTTGCCACTGTTCGATGGTTCTTCCAAACAACGGCTTAACCCTGAAACCGTTCTCTCTTGCTCTCACTCTTAATCTTTAA 888 0.4426 MTKHIRATHAPVHGHIDVRPLFHVVVDIFHRSLSHPWLALFRYMCGKQGQMDAMKSSAYQSDLANVLDISYHAINKIFLRDVHATTMGILGMLSSYSWDAKVVIALAANFKEFWLVAQLHATNRLAKSFQTINNLLKAMLDVTNNVVQFHELPSQYIDPEAPEMLTASNLIPGAVYWTIRSIVSCASHVLDITGLGQGYLTSTTETWELSSLAHKLDNINTHLRMQLTLCPQYLDDNRERHLKHFGSFLRDPPKIIQRFSKLCFAARMIRCHCSMVLPNNGLTLKPFSLALTLNL 295
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma05g01717 295 Pfam Sieve element occlusion N-terminus 128 240 IPR027942 -
Gma05g01717 295 Pfam Sieve element occlusion N-terminus 1 129 IPR027942 -
Gma05g01717 295 PANTHER SIEVE ELEMENT OCCLUSION-RELATED 1 241 - -
Gma05g01717 295 PANTHER PROTEIN SIEVE ELEMENT OCCLUSION B-LIKE 1 241 IPR039299 GO:0010088
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma05g01717 Gma-Chr5 38851300 38852990 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma05g01717 - - gmx:100799626 369.007
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma05g01717 05 38851300 38852990 Gma08g01203 08 10245024 10248831 GST
Gma05g01717 05 38851300 38852990 Gma11g02459 11 39887477 39891066 PCT