Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma05g01471 ATGACCAATCTGCAAATACAAACAGAGGAACCCCCTCTGAGTCAAACACCGCTTCTAATTTCAATTCAGCAGCAACTAGAGAACGAGAATGAGGGAAATCATCATCATAATAATAACTATAATGAGAATAAGAAGGACCAAGACGTTCAAGTTGACGGAGAGATTGTGGAGGAGAGCCTGGTGCGGTTGGAGCGCTTTCTTACGCTGTTAGGGTTCAACCAGGACTCGCCGTTGAGCTTGGTGGTTTCGTGGAGCGTGTTCGCGGCGGTGGGAGTTGTGACGCCGCTGGTCGCGCTTTCCATGTGCGAGTGTCCGGAGTGCGACAGGTACGAGATTCAAAGCTTCGAGATGGCGATCGTGGCGTTTCAGGCGAGCCTAGCCGCCGTCTCCTTGCTCTGCCTCTCCCACAACCTTCGCAAGTACGGTCTCCGCCGGTTCCTCTTCGTTGACCGCTACTCCGGGAAGTTGCATTGCTTTCACCGCGACTACGTCGCTCAGATTTCGGGATCTATGCGCATGCTTTTTCTGTGGGTGTTGCCGTGTTTCATTCTGAAGACAGTGCGAGAAATCATTCGCATTTTCTATGTACAACATGGGTCCTGGTGGCTCTCGCTTGCTATTTTATCAGCTTTGATTATATCTTGGACTTATATGAGTACAATCTCTCTGTCAGCCTGCATTTTGTTTCACTTGGTCTGTAGTTTGCAAGTGATCCATTTTGATGATTATGGGAAGCTCTTGCAAAGGGAAAGTGATGTTTTAGTTTTTATGGAGGAGCACATTCGGTTGCGCTATCATCTCTCCAAGATAAGTCATAGGTTCAGAATCTATCTTCttctagagttcttggtcgtcacagcaagccaggttgtgactcttttGCAGGTCACTGGATATGGTCAAATGCTTACCTTCATTAATGGTGGAGATTTTGCTGTATCCACACTAGTTCAGGTGGTGGGCATCATTATTTGTCTGCATGCTGCGACAAGAATTTCTCATAGAGCTCAAAACATTGTTTCCCTTGCGAGCAGGTGGCATGCAATGCTAACATGCACATCTTCTGATGCACCCTCTCAATTGAGAAGCTCTGCTAGTGCAGGGAGCTTGGAGGCTGCAAACCATTTAAATGCAATACAAGTAGACTATTCTGAAAGTGATCTAGAGTCAATGGATTATGCTGGAATGTTTACAAATACCCAATGGACTTCCAATGTGTCTTCACATCACAAGAGACAAGCTTTTGTGATGTATTTGCAGACGAATCCAGGAGGAATCACTATATTTGGATGGACAGTTGACCGGTCTCTGGTCAACACCATATTTTTCCTTGAATTAAGTCTGGTCTTCCTGGTTACCACCATCAATTTGATTGAAAGTCCTCCGCATGCCGAGCCAGAATGTCGCATGCACACAGTAGCCATGCAGAGAAGTAGAGAAACAGTGTGTATTGTCCACCCAGGGACTGGACCAGGCACACTACTGTTAAATGCGAGGCCTCTTCCTCAATCCCCAGCAACACAGATGTCTCCAAAATTCTATTCGTCATTCTCATTCCTCAGTCAGCATACTTATCTCCGTGGATCTTGTGACTTCTAA 1599 0.4497 MTNLQIQTEEPPLSQTPLLISIQQQLENENEGNHHHNNNYNENKKDQDVQVDGEIVEESLVRLERFLTLLGFNQDSPLSLVVSWSVFAAVGVVTPLVALSMCECPECDRYEIQSFEMAIVAFQASLAAVSLLCLSHNLRKYGLRRFLFVDRYSGKLHCFHRDYVAQISGSMRMLFLWVLPCFILKTVREIIRIFYVQHGSWWLSLAILSALIISWTYMSTISLSACILFHLVCSLQVIHFDDYGKLLQRESDVLVFMEEHIRLRYHLSKISHRFRIYLLLEFLVVTASQVVTLLQVTGYGQMLTFINGGDFAVSTLVQVVGIIICLHAATRISHRAQNIVSLASRWHAMLTCTSSDAPSQLRSSASAGSLEAANHLNAIQVDYSESDLESMDYAGMFTNTQWTSNVSSHHKRQAFVMYLQTNPGGITIFGWTVDRSLVNTIFFLELSLVFLVTTINLIESPPHAEPECRMHTVAMQRSRETVCIVHPGTGPGTLLLNARPLPQSPATQMSPKFYSSFSFLSQHTYLRGSCDF 532
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma05g01471 532 Pfam Protein of unknown function (DUF3537) 59 444 IPR021924 -
Gma05g01471 532 PANTHER ZINC FINGER CONSTANS-LIKE PROTEIN (DUF3537) 6 454 - -
Gma05g01471 532 PANTHER RAS GUANINE NUCLEOTIDE EXCHANGE FACTOR K 6 454 IPR021924 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma05g01471 Gma-Chr5 36505419 36509003 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma05g01471 - - gmx:100793058 842.802
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma05g01471 05 36505419 36509003 Gma08g00954 08 8036702 8040737 GST
Gma18g00080 18 639723 642576 Gma05g01471 05 36505419 36509003 PCT
Gma11g02500 11 40200249 40203109 Gma05g01471 05 36505419 36509003 PCT
Gma05g01471 05 36505419 36509003 Gma18g00080 18 639723 642576 PCT
Gma05g01471 05 36505419 36509003 Gma11g02500 11 40200249 40203109 PCT