Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma05g01457 ATGGCTCCGAAGCCCAAACCGGCGCCGTCGCAGCCTGCTCCTCCTCCTGCCCTCGAAGATCTCTTTACCACGCTCAACCGCCACATCCAGGCTTCCGCATACGACAATGCCGTCAGGCTCACGGATCAGATTCTCGCCATTGCTCCCGGCGACGAGGACGCGCTCCGATGCAAGGTCGTCGCGCTGATAAAAAATGACCGCGTCGAGGACACACTCTCCGCCATTCGGTCCTCTAAGAAGCAGCTCGATGATTTTCATTTCCTCAAGGCATACTGCTTATACAGACAAAACAAGTTGGATGAAGCTTTGGAGTCTTTGAAAAGACAAGAGAGCAATGATGAAACAATGCTTTTGGAATGTCAGATATTGTATCGTCTTGGGAAAATGGATGCTTGCTTAGATATCTACCGCAAGCTCCAAAATTCCAAGATTGATAACATGGAAATAAATTCTGTTGCTGCTCTAGTTATGTCTGGCAGGTCATCTGAAGTTCAAGGAATGCTGGATTCACTTCGGGTTAAGGCAACAAGCAGCTTTGAATTGGCATACAACACTGCTTGTTCATTAATTGCAAGGAATGAGTACACAGATGCAGAACAACTCTTATTGTCAGGCCGAAGAATTGGTCAAGAGGTCCTGATGGAAGATAACTTGGCTGATGATGAGATAGAAATTGAATTGTCTCCTATAGCTGTACAATTAGCCTATGTTCAGCAGCTTCTTGGGCGTAAGCAAGATGCTATTGAAGCTTATACAGATGTGATTAAACGAGATATGGCTGATGAATCATCAATTGCGGTGGCTGTGAACAATCTTGTTTCACTGAAAGGTCCAAAAGATGTTTCTGATAGCCTAAGGAAACTTGATCGATTAAAAGACAAGGAGAATCAAAGCTTTCGACTAGCTCCTGGACTAGACTTGAAACTTTCAGCAAAAGAAAAGGAAGCAATATATGCAAATAGGGTTCTTTTACTTCTTCATGCCAATAAGAATGAGCAGGCACGAGAACTTGTTTCTGCATTACCAGACATGTTTCCAGAAAGTGTCATACCAATATTTCTGCAAGCTGCCCTCTTGGTTAGAGAGAACAAAGCTGGAAGGGCTGAGGAAATACTAGCACAGTTTGCTAGTAAGTTCCCTGATAAGTCCAAAGTTGTTCACTTAGCCCGGGCTCAGGTAGCTGCTGCTGCTGGCCACCCACATATTGCGGCCGATTCTCTGACTAAGATATCGGATATCCAACACATGCCTGCTACTGTTGCCACCCTTGTGTCTTTAAAAGAACGAGCTGGTGACATTGATGGTGCAGCTGCTGTGCTTGACAATGCAACTAAATGGTGGTCCAATGCTATGACTGAGGACAATAAGCTCAATACTATAACGCAAGAGGCTGCTTTGTTCAAGCTGAGGCATGGGAAGGAAGAGGAAGCTGCTCAACTCTATGAGCAGCTCGTCAAAAGCCAGGGTAGCATAGAAGCACTAGTTGGGCTGGTAACAACAGTTGCCCGCATGGATGTTGCTAAGGCAGAGCTTTATGAAAAGCAACTGAATGCTCTACCTGGTTTAAAGGGAATTGATGTGGACAGCTTGGAGCGTACTTCTGGAGTGAAACAAGTTGATGCTCCTCGTGTTGGTGTCGCTGAAACATATGAGGAAGGAAAGAATAAAACAAAATCTAAGAAAAAGAGAAAGAGAAAGCCAAGGTATCCTAAAGGTTTTGACCCTGCAAATCCAGGTCCTCCCCCAGATCCAGAAAGGTGGCTTCCCAAGAGGGAGAGATCAACATATAGGCCCAAGAGGAAGGACAAAAGAGCTGCTCAAGTGAGAGGGTCTCAAGGTGCTGTAGTTAGAGATAAGCATGATACTGGTGCCTCATCTAACAGTTCAAATCTAAAATCAAACCAGGGAACCTCCAAAGGAGCTGCGCAGAATGCAGTTTCCGAGCAAACCAAGCCTTCATCCAAGTCAAGAAAGAAATCGAGGAATTAA 1989 0.4515 MAPKPKPAPSQPAPPPALEDLFTTLNRHIQASAYDNAVRLTDQILAIAPGDEDALRCKVVALIKNDRVEDTLSAIRSSKKQLDDFHFLKAYCLYRQNKLDEALESLKRQESNDETMLLECQILYRLGKMDACLDIYRKLQNSKIDNMEINSVAALVMSGRSSEVQGMLDSLRVKATSSFELAYNTACSLIARNEYTDAEQLLLSGRRIGQEVLMEDNLADDEIEIELSPIAVQLAYVQQLLGRKQDAIEAYTDVIKRDMADESSIAVAVNNLVSLKGPKDVSDSLRKLDRLKDKENQSFRLAPGLDLKLSAKEKEAIYANRVLLLLHANKNEQARELVSALPDMFPESVIPIFLQAALLVRENKAGRAEEILAQFASKFPDKSKVVHLARAQVAAAAGHPHIAADSLTKISDIQHMPATVATLVSLKERAGDIDGAAAVLDNATKWWSNAMTEDNKLNTITQEAALFKLRHGKEEEAAQLYEQLVKSQGSIEALVGLVTTVARMDVAKAELYEKQLNALPGLKGIDVDSLERTSGVKQVDAPRVGVAETYEEGKNKTKSKKKRKRKPRYPKGFDPANPGPPPDPERWLPKRERSTYRPKRKDKRAAQVRGSQGAVVRDKHDTGASSNSSNLKSNQGTSKGAAQNAVSEQTKPSSKSRKKSRN 662
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma05g01457 662 PIRSF SRP72 10 662 IPR026270 GO:0006614
Gma05g01457 662 Gene3D Tetratricopeptide repeat domain 209 515 IPR011990 GO:0005515
Gma05g01457 662 PANTHER SIGNAL RECOGNITION PARTICLE 72 11 660 IPR026270 GO:0006614
Gma05g01457 662 Pfam SRP72 RNA-binding domain 549 598 IPR013699 GO:0006614|GO:0008312|GO:0048500
Gma05g01457 662 Pfam Putative TPR-like repeat 55 153 IPR031545 -
Gma05g01457 662 Gene3D Tetratricopeptide repeat domain 17 164 IPR011990 GO:0005515
Gma05g01457 662 SUPERFAMILY TPR-like 232 487 IPR011990 GO:0005515
Gma05g01457 662 SUPERFAMILY TPR-like 19 258 IPR011990 GO:0005515
Gma05g01457 662 MobiDBLite consensus disorder prediction 547 662 - -
Gma05g01457 662 MobiDBLite consensus disorder prediction 621 651 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma05g01457 Gma-Chr5 36391025 36396743 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma05g01457 K03108 - gmx:100791472 1178.7
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma05g01457 05 36391025 36396743 Gma08g00939 08 7916312 7924582 GST