Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma05g01139 ATGGAAATGGCAATGGCTGATAATGAGAGTGGAAGAAGTACTGGGAATTGGAGGAAAAAAATGGTTGTTTTGGTTGACCAGCTGAGGGGGTTTCCTAGTTTGGCTTGTAAGAATATGTGGAAGATGGGGCGTGATGATCCAAGAAGGCTCATCCATGCTTTCAAAGTAGGTTTCTCTCTCACTCTTGTGTCTTTGCTCTATCTCTTGGAGCCAAGCTTCCAAGGGATTGGAGAGAATGTCATGTGGGCTGTCATGACCGTCGTCTTAGTCTTTGAGTTCACCGCAGGGGCAACTTTATGCAAAGGCCTCAACAGAGGATTGGGGACAGTGTTTGCAGGAGCACTGGCATTTGTTGTTAAATATGTTGCAAATGGATCTGGCCGCGCCTTTCATGCTTTTTTCATTGGAACTACCGTTTGTATTGTAGGTGCTGCAACCAGTTATATGAGATTCTTCCCCTACATAAAGAAGAATTATGATTATGGGGTCCTTATATTTCTCTTGACCTTCAACTTGATAACTGTTTCGAGTTACCGGACCGAAAATCTCTTCAAGATGATATACCAGCGCTTCTACACCATAGCCATAGGCTGTGCCATATGCCTTCTGATGAGTCTATTGGTATTTCCAAATTGGTCAGGGGAAGCTCTCCATAACTCAACAGCTTTCAAGCTTGAAGGCCTAGCTAAATCTATAGAAGCTTGTGTCAACGAATACTTTAATGGAGAAATGGAAGCCTCTAATGATAAAATATCAGCTGAGGATATATACAAAGGTTACAAGGCTGTTTTGGATTCAAAAACCACTGATGAAACTCTGGCATTACATGCAAGTTGGGAGCCAAGACATTCATGTCACAAATTTCCATGGCAGCAGTATGTAAAAGTTGGAACTGTTCTTCGTCAATTTGGGTATACAGTGGTAGCCCTACATGGCTGTTTGAAAACAGAAATTCAGACTCCACCATCGGTTCGAGTCCTGTTCAAGAACCCTTGCACAAAGCTTGCATCAGAAGTATCAAAAGTCCTGATAGAACTTGCCAATAGCATAAGGAACCGTCGCCGTTGCTCTCAAGAAATACTCTCTAATAATCTCCAAGAAGCCCTGCAGGACCTCAACACTGCCATAAAGTCTCAGCCTCGGCTTTTCTTAGGCACCTCCAACGACAGCCAAGACACTGACATATTGGCCATAGCCGCAGCACACGCAGCAGGACTAAGAAACCAAGGAAATGGCTCGCTATCAAGTGTTAAAATAGACACTTCAACCTTGCAAGAGTGCAAAGCACAATGCACTGAACAGCCAAAGGAAGCAGCAGAACGAAAGATGTTGAGACACCAGCTGAGTATAATCGCAATAACTAGCCTTGAGTTCTCTGAAGCCTTGCCTTTTGCTGCCTTTGCATCTTTGCTTGTGGAGACAGTGGCAAAATTGGACCTTGTTATAGAGGAAGTTGAAGAACTAGGGAGGTTAGCACGCTTCAAAGATTACAGACACGATGATAAGATTGTTATCAGTTGTGAAACACCACGAGTTGATGTGTTAGAAGACCATATACCTACTCGTGGAGCAGAATAA 1578 0.4347 MEMAMADNESGRSTGNWRKKMVVLVDQLRGFPSLACKNMWKMGRDDPRRLIHAFKVGFSLTLVSLLYLLEPSFQGIGENVMWAVMTVVLVFEFTAGATLCKGLNRGLGTVFAGALAFVVKYVANGSGRAFHAFFIGTTVCIVGAATSYMRFFPYIKKNYDYGVLIFLLTFNLITVSSYRTENLFKMIYQRFYTIAIGCAICLLMSLLVFPNWSGEALHNSTAFKLEGLAKSIEACVNEYFNGEMEASNDKISAEDIYKGYKAVLDSKTTDETLALHASWEPRHSCHKFPWQQYVKVGTVLRQFGYTVVALHGCLKTEIQTPPSVRVLFKNPCTKLASEVSKVLIELANSIRNRRRCSQEILSNNLQEALQDLNTAIKSQPRLFLGTSNDSQDTDILAIAAAHAAGLRNQGNGSLSSVKIDTSTLQECKAQCTEQPKEAAERKMLRHQLSIIAITSLEFSEALPFAAFASLLVETVAKLDLVIEEVEELGRLARFKDYRHDDKIVISCETPRVDVLEDHIPTRGAE 525
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma05g01139 525 Pfam Aluminium activated malate transporter 40 489 IPR020966 GO:0015743
Gma05g01139 525 PANTHER ALUMINUM-ACTIVATED MALATE TRANSPORTER 10 1 516 - -
Gma05g01139 525 PANTHER ALUMINUM-ACTIVATED MALATE TRANSPORTER 12-RELATED 1 516 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma05g01139 Gma-Chr5 32432464 32435869 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma05g01139 9 510 Miscellaneous Gene Families AT4G17970 58.608 0.0 609
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma05g01139 - - gmx:100778322 1025.39
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma05g01139 05 32432464 32435869 Gma05g01139 05 32432464 32435869 ECH