Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma05g00644 ATGGCCGAATCGGTGGAGCTTCCGAGTCGCTTGGCGATTCTCCCGTTCAGGAACAAGGTCCTCTTGCCCGGCGCCATCATCAGAATCCGCTGCACTTCCCCCACCAGTGTGAAGTTGGTGGAACAAGAACTTTGGCAGCGAGAAGAGAAGGGGTTGATTGGCATCCTTCCAGTGCGTGATGCCGCTGAAATTAAGCCAGTGGGTCCCACTGTATCTGAAGGAGCTGATTCAACAAACCAGAACTCAAAAGTTCAGAGCGGTTCATCGGATTCTCATAAGCTCGATACAAAGAAGCAGAATGATGTTCATTGGCATAACAGGGGGGTAGCTGCTCGACCATTACATTTATCAAGGGGAGTGGAGAAACCAAGTGGGAGGGTCACATACACAGTTGTTCTTGAAGGTTTGTGCAGATTTAGTGTCCAGGAACTGAGCATGAGAGGAATATACCATACTGCGAGGATAACTTCCCTTGAAATGACCAAGACTGAACTGGAACAAGTGGAGCAAGACCCAGATTTCATAATGTTGTCTCGCCAATTTAAAGCTACTGCAATGGAGCTTATTTCTGTTTTGGAGCTGAAACAAAAAACTGGTGGTAGGACAAAAGTCCTTTTGGACAACGTTCCAGTTCACAAGTTGGCTGATATATTTGTTGCTAGTTTTGAGATAAGTTTTGAAGAACAATTATCTATGCTGGATTTAATTGACCCCAAAGTGAGGCTTTCAAAAGCTACTGAGTTAGTTGACAGGCATTTACAGTCAATACGTGTAGCTGAGAAAATTACACAAAAGGTTGAAGGACAATTGTCAAAATCTCAAAAAGAATTTCTTTTGCGCCAGCAGATGAGGGCTATAAAAGAGGAACTTGGTGATAATGATGATGATGAGGATGACCTGGCTGCCCTTGAAAGAAAGATGCAAAGTGCAGGAATGCCACAGAATATATGGAAGCATGGACACAGAGAGTTGAGGAGGCTTAAAAAAATGCAGCCTCAGCAACCAGGGTATAACAGTTCAAGGGTTTATCTAGAGCTTCTTGCTGATCTGCCCTGGCAGAAGGCCAGTGAAGAGATTGATCTGGACTTAAGAGCTGCACGGAAGCGACTGGATAGTGATCACTATGGTTTAGTGAAGGTTAAGCAACGGATAATTGAATACCTGGCGGTTCGCAAGCTTAAACCAGATGCAAGGGGTCCAGTGTTGTGCTTTGTTGGACCACCAGGTGTTGGGAAAACATCATTGGCATCTTCTATTGCTGCTGCTTTGGGAAGAAAATTTGTACGCATATCCCTTGGTGGAGTGAAGGATGAGGCTGATATTAGAGGACATAGGAGAACATATGTGGGAAGCATGCCTGGGAGGCTTATAGATGGATTAAAGAGAGTAGCCGTTTGCAATCCCGTCATGTTGCTTGATGAAGTTGACAAGACAGGTTCTGATATTCGTGGAGATCCAGCTTCAGCATTACTAGAGGTTCTTGATCCGGAACAAAATAAATCGTTCAATGATCACTATTTGAATGTTCCATTTGATCTATCCAAGGTAGTTTTTGTGGCTACAGCAAATAGGTTGCAACCCATTCCTCCACCACTTCGTGATAGAATGGAAGTAATTGAGCTTCCTGGATATACACCTGAGGAAAAGCTCCAAATTGCCATGCGGCATTTGATTCCAAGAGTTTTAGACCAGCATGGATTGAGTTCTGAGTTTCTTCAGATTCCTGAGGCAATGGTGAAGCTTGTTATTCAGAGATATACTAGGGAAGCTGGTGTGCGAAACTTGGAGAGGAATCTAGCTGCCTTGGCTCGAGCTGCTGCAGTAAGAGTTTTAGAGCAAGAACAAGTAGTTCCATTAAACAAAGGGATGCAAGGACTTGCTACACCACTTGTGGAAAACAGACTTGCTGATGGAACTGAAGTTGAAATGGAAGTGATACCAATGGGTGTCAATAGTCGGGACATCTCTAACACGTTTAGGATTGCCTCTCCATTTGTTGTTGATGAAACTATGCTTGAAAAAGTGCTTGGGCCCCCAAGATTTGATGGCAGAGAAGCTGCAGAACGTGTGGCTACCCCTGGGGTCACTGTTGGGCTAGTTTGGACTGCTTTTGGTGGAGAAGTTCAGTTTGTGGAGGCTACAGCTATGGTTGGGAAGGGTGAACTGCATCTCACTGGACAACTTGGTGATGTAATAAAAGAATCAGCTCAGATTGCACTAACATGGGTAAGGGCAAGGACAACTGATCTTAGGCTTGGTGCTACAGAGGGATTTAATATTTTGGAGGGCCGTGATGTACACATACATTTTCCTGCAGGCGCTGTACCTAAAGATGGGCCCTCAGCTGGTGTGACTTTGGTCACAGCATTGGTATCACTTTTCAGTCAGCAAAGGGTGAGATCAGACACGGCTATGACTGGAGAGATGACATTGAGGGGTCTTGTTCTACCTGTTggtggtgtcaaggataagATATTAGCTGCACATCGTTACGGTATTAAGAGAGTTATTCTACCTGAAAGGAACTTGAAGGACTTGGTTGAAGTACCATCGTCTGTGCTATCCAATTTGGAGATCCTGCTTGCTAAACGAGTGGAAGATGTGTTAGAACATGCTTTTGATGGTGGGTGCCCTTGGAGGCAACACTCGAAGTTATAG 2658 0.4443 MAESVELPSRLAILPFRNKVLLPGAIIRIRCTSPTSVKLVEQELWQREEKGLIGILPVRDAAEIKPVGPTVSEGADSTNQNSKVQSGSSDSHKLDTKKQNDVHWHNRGVAARPLHLSRGVEKPSGRVTYTVVLEGLCRFSVQELSMRGIYHTARITSLEMTKTELEQVEQDPDFIMLSRQFKATAMELISVLELKQKTGGRTKVLLDNVPVHKLADIFVASFEISFEEQLSMLDLIDPKVRLSKATELVDRHLQSIRVAEKITQKVEGQLSKSQKEFLLRQQMRAIKEELGDNDDDEDDLAALERKMQSAGMPQNIWKHGHRELRRLKKMQPQQPGYNSSRVYLELLADLPWQKASEEIDLDLRAARKRLDSDHYGLVKVKQRIIEYLAVRKLKPDARGPVLCFVGPPGVGKTSLASSIAAALGRKFVRISLGGVKDEADIRGHRRTYVGSMPGRLIDGLKRVAVCNPVMLLDEVDKTGSDIRGDPASALLEVLDPEQNKSFNDHYLNVPFDLSKVVFVATANRLQPIPPPLRDRMEVIELPGYTPEEKLQIAMRHLIPRVLDQHGLSSEFLQIPEAMVKLVIQRYTREAGVRNLERNLAALARAAAVRVLEQEQVVPLNKGMQGLATPLVENRLADGTEVEMEVIPMGVNSRDISNTFRIASPFVVDETMLEKVLGPPRFDGREAAERVATPGVTVGLVWTAFGGEVQFVEATAMVGKGELHLTGQLGDVIKESAQIALTWVRARTTDLRLGATEGFNILEGRDVHIHFPAGAVPKDGPSAGVTLVTALVSLFSQQRVRSDTAMTGEMTLRGLVLPVGGVKDKILAAHRYGIKRVILPERNLKDLVEVPSSVLSNLEILLAKRVEDVLEHAFDGGCPWRQHSKL 885
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma05g00644 885 PANTHER ATP DEPENDENT LON PROTEASE FAMILY MEMBER 1 885 IPR027065 GO:0004176|GO:0004252|GO:0005524|GO:0030163
Gma05g00644 885 PANTHER LON PROTEASE HOMOLOG 2, PEROXISOMAL 1 885 - -
Gma05g00644 885 MobiDBLite consensus disorder prediction 90 105 - -
Gma05g00644 885 CDD AAA 383 544 - -
Gma05g00644 885 Gene3D - 363 541 IPR027417 -
Gma05g00644 885 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 350 616 IPR027417 -
Gma05g00644 885 PIRSF Lon_proteas 1 625 IPR004815 GO:0004176|GO:0005524|GO:0006508
Gma05g00644 885 PIRSF Lon_proteas 651 876 IPR004815 GO:0004176|GO:0005524|GO:0006508
Gma05g00644 885 SUPERFAMILY PUA domain-like 10 250 IPR015947 -
Gma05g00644 885 Gene3D - 692 877 IPR014721 -
Gma05g00644 885 MobiDBLite consensus disorder prediction 72 89 - -
Gma05g00644 885 PRINTS Endopeptidase La (Lon) serine protease (S16) signature 406 425 - -
Gma05g00644 885 PRINTS Endopeptidase La (Lon) serine protease (S16) signature 693 709 - -
Gma05g00644 885 PRINTS Endopeptidase La (Lon) serine protease (S16) signature 775 794 - -
Gma05g00644 885 PRINTS Endopeptidase La (Lon) serine protease (S16) signature 805 824 - -
Gma05g00644 885 PRINTS Endopeptidase La (Lon) serine protease (S16) signature 828 846 - -
Gma05g00644 885 ProSiteProfiles Lon proteolytic domain profile. 690 875 IPR008269 GO:0004176|GO:0004252|GO:0006508
Gma05g00644 885 SMART AAA_5 398 543 IPR003593 -
Gma05g00644 885 SUPERFAMILY Ribosomal protein S5 domain 2-like 693 873 IPR020568 -
Gma05g00644 885 Hamap Lon protease homolog 2, peroxisomal [LONP2]. 3 885 IPR027501 GO:0004252|GO:0006515
Gma05g00644 885 TIGRFAM lon: endopeptidase La 13 873 IPR004815 GO:0004176|GO:0005524|GO:0006508
Gma05g00644 885 Gene3D - 542 681 - -
Gma05g00644 885 ProSitePatterns ATP-dependent serine proteases, lon family, serine active site. 778 786 IPR008268 GO:0004176|GO:0004252|GO:0006508
Gma05g00644 885 Gene3D - 170 294 - -
Gma05g00644 885 Pfam ATPase family associated with various cellular activities (AAA) 402 539 IPR003959 GO:0005524|GO:0016887
Gma05g00644 885 Coils Coil 286 306 - -
Gma05g00644 885 Pfam Lon protease (S16) C-terminal proteolytic domain 667 873 IPR008269 GO:0004176|GO:0004252|GO:0006508
Gma05g00644 885 MobiDBLite consensus disorder prediction 68 105 - -
Gma05g00644 885 ProSiteProfiles Lon N-terminal domain profile. 11 251 IPR003111 -
Gma05g00644 885 SMART lon_5 10 251 IPR003111 -
Gma05g00644 885 Pfam ATP-dependent protease La (LON) substrate-binding domain 11 251 IPR003111 -
Gma05g00644 885 Gene3D - 1 159 IPR046336 -
Gma05g00644 885 Gene3D - 302 350 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma05g00644 Gma-Chr5 7101778 7112142 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma05g00644 K01338 - gmx:100796563 1692.94
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma05g00644 05 7101778 7112142 Gma05g00644 05 7101778 7112142 ECH
Gma17g01382 17 12804130 12813894 Gma05g00644 05 7101778 7112142 GST