Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma05g00547 ATGGCTTCCAAGGCTGCACTTCTCTTGTGTTTCAATGTTCTCTTCTTCACCGTGGTTAGCTCCACATATGTGCCATGCAACCCACCCCCCAAAACTCCAAAACACCCACCTGTCCCAAAGCCACCTTCCCCAAAGCAAGCAAGTTGCCCCAAAGACACTATTAAGTTTGGTGTGTGTGCTGATGTGTTAGGTTTGATCAACGTGCAACTTGGGAAGCCACCAAAGACCCCATGCTGCAACCTCATTGAGGGTCTCGCTGATCTTGAAGCTGCAGTGTGCCTCTGCACTGCTCTCAAAGCTAATGTGTTGGGCATCAACCTCAATGTTCCAGTGAACTTGAGCTTGCTACTCAACTACTGTGGAAAGGGTGTTCCCAAGGGTTTCGTCTGCTATTAA 396 0.4899 MASKAALLLCFNVLFFTVVSSTYVPCNPPPKTPKHPPVPKPPSPKQASCPKDTIKFGVCADVLGLINVQLGKPPKTPCCNLIEGLADLEAAVCLCTALKANVLGINLNVPVNLSLLLNYCGKGVPKGFVCY 131
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma05g00547 131 Gene3D - 44 131 IPR036312 -
Gma05g00547 131 CDD HPS_like 47 130 IPR027923 -
Gma05g00547 131 PANTHER BINDING PROTEIN, PUTATIVE-RELATED 2 130 - -
Gma05g00547 131 Pfam Hydrophobic seed protein 49 130 IPR027923 -
Gma05g00547 131 SMART aai_6 49 130 IPR016140 -
Gma05g00547 131 SUPERFAMILY Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin 52 130 IPR036312 -
Gma05g00547 131 PANTHER - 2 130 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma05g00547 Gma-Chr5 5395249 5395983 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma05g00547 42 130 Acyl Lipid Metabolism Gene Families AT4G22490 34.831 4.18e-12 57.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma05g00547 - - gmx:100499693 229.95
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma05g00547 05 5395249 5395983 Gma05g00547 05 5395249 5395983 ECH