Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma05g00541 ATGGGCCAGGGCCATGAACCCCCCAAATCCCCTGCGGCTGCGCCACCGTTGCTCCGCCGCATCCACAACCTCGACAACGCAATCTCCCTCTACATCCACACCCTGACCCGCCCCATCGCTCCACGTCCCCTCCTCCGCTTCCTAGAGCTTTTGGCGGACTTCCGCTTCTTCTTCCCCGTCTCCCTCTCCCTCTACCTTGCCGCTCCCTCCTCCTCCCCTCTCCGCCGCAACCTCCTCCTCCCCCTCATCCTCTGCTCCCTCCTCGACCTCCTCTTCATCGCCCTCCTCAAATTCCTCGTCCGCCGATCCCGCCCCTCCTACTCCAACCACTCCCAATACAGCGCCGTCGTTTCGGTCGACAACTTCTCCTTCCCCAGCGGCCACTCCTCCCGCGTCTGCTTCGTCGCTTCCGTCTTCTCCCTCTCCCGCTCCTCCCTCCTAGCGGATCTCAGCCGTCCACGTGTCGCCATCCTCGTTCGTCGCTGGTTTGCAGGAGACGACGCTCTTGCCGTTGATATGCTCCTCGCCGCCATTTGGGCCTGGGCCGTGATCACCGTGGTTTCGAGAGTCGCTCTCGGGAGGCATTACGTCATCGACGTCTTCTTTGGCGCTTGCTTCGGCGTTCTCGAAGCGATGGTCACCTTTCGCGTTCTCGAATACCGAGGGTTGATTTGA 675 0.6222 MGQGHEPPKSPAAAPPLLRRIHNLDNAISLYIHTLTRPIAPRPLLRFLELLADFRFFFPVSLSLYLAAPSSSPLRRNLLLPLILCSLLDLLFIALLKFLVRRSRPSYSNHSQYSAVVSVDNFSFPSGHSSRVCFVASVFSLSRSSLLADLSRPRVAILVRRWFAGDDALAVDMLLAAIWAWAVITVVSRVALGRHYVIDVFFGACFGVLEAMVTFRVLEYRGLI 224
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma05g00541 224 Gene3D Phosphatidic acid phosphatase type 2/haloperoxidase 44 221 - -
Gma05g00541 224 SMART acid_phosph_2 78 215 IPR000326 -
Gma05g00541 224 Pfam PAP2 superfamily 79 221 IPR000326 -
Gma05g00541 224 PANTHER SPHINGOSINE-1-PHOSPHATE PHOSPHOHYDROLASE 13 220 - -
Gma05g00541 224 PANTHER AT30094P 13 220 - -
Gma05g00541 224 SUPERFAMILY Acid phosphatase/Vanadium-dependent haloperoxidase 19 221 IPR036938 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma05g00541 Gma-Chr5 5235456 5238774 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma05g00541 K22904 - gmx:100793065 351.673
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma05g00541 05 5235456 5238774 Gma05g00541 05 5235456 5238774 ECH
Gma17g01291 17 11504575 11505240 Gma05g00541 05 5235456 5238774 GST