Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma05g00431 ATGGGGAAATCACGAAAGTACTCAAAAGGTCATGCCACCGGTTTTGTTCCAGATTTTCGCCATGCTGTTGAGACTATGGGTGAATCAGAAGGACTTGGTAACTTGGGAAGGGTTGATAATGAGTTGACAATGTCAGAAATTTCATGTGCCCCAAAGAGAAAAAGGGTTGATGAGAGTTTTGATGTGCCATTTCAACTGTTATCTTTAACAAAGATGGCCCGTTCTGGGAGAAAGGACTTGACACTGAGATTAAAATCCGAACTTGAAGAAGTAAGGAAACTTCAAAAGAAAATTGCTGGTATGAGTTCAATCACTACTGAATTATCTCCATATAGTGACATAAGGAGCTGCAGTGTGGGAGAGAAGAGGCCTCCACTGGAATCATTAGCACTGCATGGTAAGAAGCGCCCACTACTAAAGCATAACGGTCCTAAAACAAAGAGAAGTATTTCTGGGCGATTTATATCTGCGAAATCTGCTGCACCAGTAACTCCTTCATATGCCGTGCTGATGAAGCAGTGTGAGACATTGCTTAAGCGCGTGATGTCTCATCAATTTGGTAAAGTTTTTGACAAACCGGTTGACATTGTGAAATGGAACATTCCAGACTATTTCACTATCATCAAGCACCCGATGGATTTGGGTACTGTGAAGAGTAAGCTGATTTCGTGTGAATATACAAGTCTTATGGATTTTGCTGCAGATGTGCGGCTGACTTTCTCAAATGCAATGAGTTATAATCCACCGGGCAATGATGTGCATGTCATGGCAGAGACACTAAGTAAATATTTTGAAACAAGATGGAAGCCTATAGAGAAGATTCTTGCCATTGATGATGTGCCATCTGAGCCTTCAAAACCCACTACTTGTATTGAAAAATCCGAAATTGTTGATCCTCCTGTGAAAAAAAAGAAAATAACACCAAATGGCACTAATGTCAAGCCAGAGCCCATTAAAAGAATCATGACTGGTGAGGAGAAGCAAAAGTTGAGTATGGAATTGGATGCGTCAGTTGTTGAATTGCCTGAAAACATTATTGATTTCTTGAAGGAGCAAAGTTATAATGCTAGCCAAATAAATGACGATGAAATTGAGATTGATATAGATGCCCTCAGTGATGATACATTATTTAAACTGCGGAAGCTTCTTGATGATTTTATGCTAGAGAAGCAAAAAACCCTGGCAAAACCTGGACCATGTGAAATTCAGCCAGCCAATGAATCTGGATTTAGCAATTCATTGCAACAATGTGAAGGCAATGAACCAATTGAAGAGGAGGTTGACATTGTTGGTGGGGATGATCCTCCTCTTCCAAGTTACCCTCCAGCAGAGATTGAGAATGGTGGCACCAACAAAACAAGTGAACACAGTTCAAGCAGCTCTAGTAGTGAATCTGGCTCTTCATCCAGTGATTCAGATAGTGAGTCAGATAGTGAACCAGGCATTGCTAAAGCATCAGACCATTTTAATCCTATGAAGGAAAAGGTTGGATCTGGCTTGTCTATTGATCAAAAGGAGGGGAATCTTGATAATTCAGAAACTGAAATCGACTCCATGAATGCAGCTGGCCATGTTGAGCAGAGTTCCCAGACTGATTCAGTTAGTGATGAACCTGAAAACCACCAAGAGGGGGAGAATGCTCCATCTAAGAAGCAAGTATCCCCCGATAAGCTCTACCGTGCAGCTTTATTAAGAAGCCGATTTGCTGACACCATACTTAAAGCTCAGGAAAAGACACTTGAAAAGGGTGACAAGTGGGATCCTGAAAAACTTAGGATGGAACGAAAAGAGCTAGAAAGGCGGCAGAAGGAGGAGAAAGCTCGGTTGCAGGCAGAGGCAAAGGCTGCAGAAGAGGTTCGGAGGAAAGCTGAAGCCGAAGCAGCAACTGAAGCCAAAAGAAAGAGGGAACTGGAAAGAGAAGCAGCTCGTCAGGCTTTGCAAAAGATGGAGAAGACAATTGGTATCAGTGAGAGTAGTCAATTTTTGGAAGATCTAGAGATGCTGAGTGGTTTACTAGATGAACATTTACCAAATTTCACAGAGGAAAGAAGTCCTGATCATCTTGAAAATGGGCTGGGTAGTTTCAAACTACAGGGAAGTTGTAATCCGTTAGAACAACTAGGCTTGTACATGAAGGCTGATGAGGAGGAAGAAGAAGAAGAAATGCCTCAGAGTACTACAAGAGAAACAAATGATGTAGAAGAAGGAGAAATCAATTGA 2220 0.4167 MGKSRKYSKGHATGFVPDFRHAVETMGESEGLGNLGRVDNELTMSEISCAPKRKRVDESFDVPFQLLSLTKMARSGRKDLTLRLKSELEEVRKLQKKIAGMSSITTELSPYSDIRSCSVGEKRPPLESLALHGKKRPLLKHNGPKTKRSISGRFISAKSAAPVTPSYAVLMKQCETLLKRVMSHQFGKVFDKPVDIVKWNIPDYFTIIKHPMDLGTVKSKLISCEYTSLMDFAADVRLTFSNAMSYNPPGNDVHVMAETLSKYFETRWKPIEKILAIDDVPSEPSKPTTCIEKSEIVDPPVKKKKITPNGTNVKPEPIKRIMTGEEKQKLSMELDASVVELPENIIDFLKEQSYNASQINDDEIEIDIDALSDDTLFKLRKLLDDFMLEKQKTLAKPGPCEIQPANESGFSNSLQQCEGNEPIEEEVDIVGGDDPPLPSYPPAEIENGGTNKTSEHSSSSSSSESGSSSSDSDSESDSEPGIAKASDHFNPMKEKVGSGLSIDQKEGNLDNSETEIDSMNAAGHVEQSSQTDSVSDEPENHQEGENAPSKKQVSPDKLYRAALLRSRFADTILKAQEKTLEKGDKWDPEKLRMERKELERRQKEEKARLQAEAKAAEEVRRKAEAEAATEAKRKRELEREAARQALQKMEKTIGISESSQFLEDLEMLSGLLDEHLPNFTEERSPDHLENGLGSFKLQGSCNPLEQLGLYMKADEEEEEEEMPQSTTRETNDVEEGEIN 739
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma05g00431 739 Coils Coil 77 97 - -
Gma05g00431 739 Pfam Bromodomain 174 258 IPR001487 GO:0005515
Gma05g00431 739 CDD Bromo_plant1 170 268 IPR037377 -
Gma05g00431 739 Pfam Bromodomain extra-terminal - transcription regulation 322 384 IPR027353 -
Gma05g00431 739 ProSiteProfiles Bromodomain profile. 182 254 IPR001487 GO:0005515
Gma05g00431 739 Gene3D - 158 278 IPR036427 GO:0005515
Gma05g00431 739 SMART bromo_6 163 273 IPR001487 GO:0005515
Gma05g00431 739 MobiDBLite consensus disorder prediction 676 739 - -
Gma05g00431 739 MobiDBLite consensus disorder prediction 597 616 - -
Gma05g00431 739 MobiDBLite consensus disorder prediction 397 416 - -
Gma05g00431 739 Coils Coil 593 652 - -
Gma05g00431 739 MobiDBLite consensus disorder prediction 427 558 - -
Gma05g00431 739 PRINTS Bromodomain signature 185 198 IPR001487 GO:0005515
Gma05g00431 739 PRINTS Bromodomain signature 201 217 IPR001487 GO:0005515
Gma05g00431 739 PRINTS Bromodomain signature 217 235 IPR001487 GO:0005515
Gma05g00431 739 PRINTS Bromodomain signature 235 254 IPR001487 GO:0005515
Gma05g00431 739 PANTHER TRANSCRIPTION FACTOR GTE8 2 722 - -
Gma05g00431 739 Coils Coil 502 522 - -
Gma05g00431 739 ProSiteProfiles NET domain profile. 312 394 IPR027353 -
Gma05g00431 739 Gene3D - 316 393 IPR038336 -
Gma05g00431 739 MobiDBLite consensus disorder prediction 513 535 - -
Gma05g00431 739 PANTHER TRANSCRIPTION FACTOR GTE10 2 722 - -
Gma05g00431 739 MobiDBLite consensus disorder prediction 446 476 - -
Gma05g00431 739 SUPERFAMILY Bromodomain 163 272 IPR036427 GO:0005515
Gma05g00431 739 MobiDBLite consensus disorder prediction 724 739 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma05g00431 Gma-Chr5 4074922 4081606 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma05g00431 - - gmx:100787770 1337.4
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma05g00431 05 4074922 4081606 Gma05g00431 05 4074922 4081606 ECH