Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma05g00424 ATGTTGCCTCCTTTTGCTGTCGATATCAACGGTATAAAAGATAAGCTCACTTATCAGTTCCGCCCTTGGCAACGCTCCTTCCAATTCTGGGTTCGAGCCATTGACATTTACACCGGTTACAAGGTGTTTCAAGTGAGAGTGAATTTCGTCAAAGATGCGCAGAAGCAGGAAGCAATGTGGGAGAAGCAGCACGAGCTTGCCGCCGATAAGATTTTCGCCATGTGCTACGACCTTGGAGGTTTCTTCCTCAAGATTGCTCAAATTATTGGGAAGCCCGATTTGGCCCCGGCTGCCTGGGTGAAAAGGCTTGTTACGCTATGTGATAGGGCTCCTCCAACCCCTTTTGATGTGGTGAAACTAGTGCTGGAGAATGAGCTGGGACAGGGTATTGATGATGTTTTTGAAAGGTTCGATGTCGAACCCCTTGGTTCTGCTTCAATTGCTCAGGTTCATAGAGCAAGACTGAAAGGTGATACAGGTGATGTTGTTGTCAAGGTTCAACATCCTGGAATTCAGGATCTGATGATGACGGATATCCATAACTTGCAAGTGTTTGCATTGTACATGCAAAAAACAGATATCAAATTTGATCTATATTCAGTGACTAAGGAAATGGAAAAACAGATTGGATATGAATTTGACTTCACGAGGGAGGCTAATGCGATGGAAAGGATTAGAAAGTTCTTGTATGAAAGTAACAAAAAGACTCCTGTTTTGGTGCCGCGAGTAATACGAAATATGGTTACTAGAAGGGTCCTAGTTATGGAATATATTGATGGGATTCCTATAATGAGCCTTGGTGATGAAATAGCAAAGAGGGGCATAAATCCTCATGGCAAGGTTGCAGCAGCAGCTAAACAGAAAATTCTTCAAAGCTTGACTCTAGCATATGGTCAAATGATTTTGAAAAGTGGATTCTTCCATGCAGATCCTCATCCAGGAAATATCCTGATTTGTAAAGGATCAGAGGTTGCCTTGCTAGACTATGGACAGGTGAAGGATCTCCCAGATCAGTTGAGGCTTGCCTATGCTAATCTAGTTCTTGCAATTGCTAACGGTGACCCATTAAGAGCTTCAGAGAGCTATAGGGAGCTTGGTATAGAAACCTTTAGCAAATGTGAAAATGAGCTACAAGAATTGTTTAAACTAGCACAGACAATGTTTGATACAAAATTGCCTCCAGGAGTGGTAATGCTGCAACCTTTCTCAGAGGAATCTTCAATTAAAAAAGTTGCTGTTCAGTCTTTTCCAGAAGAACTGTTTTCTGTACTTCGGACAGTGCATCTACTGAGGGGACTTAGCATTGGACTTGGAATCAATTACTCTTGTGCAGAACAGTGGAGACCCTTCGCAGAAGAAGCTTTGTCCCGAGCTGGCAGATTAAAACGTGGCACTGTGACTCTTGCTTAA 1410 0.4284 MLPPFAVDINGIKDKLTYQFRPWQRSFQFWVRAIDIYTGYKVFQVRVNFVKDAQKQEAMWEKQHELAADKIFAMCYDLGGFFLKIAQIIGKPDLAPAAWVKRLVTLCDRAPPTPFDVVKLVLENELGQGIDDVFERFDVEPLGSASIAQVHRARLKGDTGDVVVKVQHPGIQDLMMTDIHNLQVFALYMQKTDIKFDLYSVTKEMEKQIGYEFDFTREANAMERIRKFLYESNKKTPVLVPRVIRNMVTRRVLVMEYIDGIPIMSLGDEIAKRGINPHGKVAAAAKQKILQSLTLAYGQMILKSGFFHADPHPGNILICKGSEVALLDYGQVKDLPDQLRLAYANLVLAIANGDPLRASESYRELGIETFSKCENELQELFKLAQTMFDTKLPPGVVMLQPFSEESSIKKVAVQSFPEELFSVLRTVHLLRGLSIGLGINYSCAEQWRPFAEEALSRAGRLKRGTVTLA 469
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma05g00424 469 Pfam ABC1 atypical kinase-like domain 106 358 IPR004147 -
Gma05g00424 469 ProSiteProfiles Protein kinase domain profile. 136 469 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma05g00424 469 PANTHER ABC1 FAMILY PROTEIN 11 462 - -
Gma05g00424 469 SUPERFAMILY Protein kinase-like (PK-like) 108 333 IPR011009 -
Gma05g00424 469 CDD ABC1_ADCK3-like 106 361 - -
Gma05g00424 469 Gene3D Transferase(Phosphotransferase) domain 1 132 345 - -
Gma05g00424 469 PANTHER - 11 462 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma05g00424 Gma-Chr5 4023280 4030725 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma05g00424 K08869 - gmx:100797467 934.48
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma05g00424 05 4023280 4030725 Gma05g00424 05 4023280 4030725 ECH
Gma17g01182 17 10357923 10366264 Gma05g00424 05 4023280 4030725 GST