Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma05g00422 ATGGCTTCGCAGGAGAATGGTCGTCCATTACCTAAATTCGGTGAGTGGGATGTGAACAATCCTGCCTCAGCTGAAGGTTTTACTGTCATATTCAACAAGGCTAGAGATGAGAAGAAGACTAACACGGCAACCCCACGTAGATCTGATCCTGTGTTCAAGAATGAGAATTATAACACTCCTCAATATTCTGGAAAGAGAAAGTGGTTTTGCTGCGGCTGA 219 0.4429 MASQENGRPLPKFGEWDVNNPASAEGFTVIFNKARDEKKTNTATPRRSDPVFKNENYNTPQYSGKRKWFCCG 72
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma05g00422 72 MobiDBLite consensus disorder prediction 35 58 - -
Gma05g00422 72 PANTHER RPM1-INTERACTING PROTEIN 4-LIKE 1 71 - -
Gma05g00422 72 Pfam Cleavage site for pathogenic type III effector avirulence factor Avr 5 40 IPR008700 -
Gma05g00422 72 PANTHER RPM1-INTERACTING PROTEIN 4 (RIN4) FAMILY PROTEIN 1 71 IPR040387 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma05g00422 Gma-Chr5 3986777 3988459 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma05g00422 - - gmx:100526954 158.303
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma05g00422 05 3986777 3988459 Gma05g00422 05 3986777 3988459 ECH