Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma05g00328 ATGGCATTACGCGAGCTTATTGTGATGGGGTTATTGCTGCTGGTTTGTCTTGCAAAGGTTTCATCTGATGTTAACATAGAAAAGGAGCAAGATGAAGAATTTCGCTTTCCTGTTGACCATCTTATCGTGAGAGGCGGGAACAGAAGGCTAATGCAGGACATAGATTGTGGAGGATTGTGCAAGACAAGGTGCAGTGCCCATTCAAGGCCAAATGTGTGCAACAGGGCTTGTGGCACATGTTGTGTGAGGTGCAAGTGTGTTCCACCTGGAACTTCCGGCAACAGGGAGCTTTGTGGGACCTGCTATACTGATATGACCACCCATGGTAACAAGACCAAGTGCCCGTAA 348 0.477 MALRELIVMGLLLLVCLAKVSSDVNIEKEQDEEFRFPVDHLIVRGGNRRLMQDIDCGGLCKTRCSAHSRPNVCNRACGTCCVRCKCVPPGTSGNRELCGTCYTDMTTHGNKTKCP 115
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma05g00328 115 PANTHER EXTENSIN, PROLINE-RICH PROTEIN 4 115 - -
Gma05g00328 115 Pfam Gibberellin regulated protein 55 115 IPR003854 -
Gma05g00328 115 PANTHER GIBBERELLIN-REGULATED PROTEIN 2-RELATED 4 115 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma05g00328 Gma-Chr5 3030478 3032136 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma05g00328 - - gmx:100306333 231.491
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma05g00328 05 3030478 3032136 Gma17g00871 17 7408897 7410681 ECH
Gma05g00328 05 3030478 3032136 Gma05g00328 05 3030478 3032136 ECH
Gma17g00871 17 7408897 7410681 Gma05g00328 05 3030478 3032136 GST
Gma05g00328 05 3030478 3032136 Gma04g01737 04 46775636 46776886 PCT
Gma05g00328 05 3030478 3032136 Gma06g01658 06 16490171 16491534 PCT
Gma04g01737 04 46775636 46776886 Gma05g00328 05 3030478 3032136 PCT
Gma06g01658 06 16490171 16491534 Gma05g00328 05 3030478 3032136 PCT