LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Gma05g00301	ATGAAGACGACGAAGGGCGGCAAGGTCATGAACCCTACCGATGCTTACCGAAAGGAGATTCGGAAGAAAGAATTGAAAAGGAATAAGAAAGAAAGAAAGAAGGTGAGGGAGGTGGGGATTTTGAAGAAAGATCCTGATCAATTGAAGAAGCAGATTGAGAACTTGGAAATGATGAAGGCTGATGGTGCTTTGGATAAAGCAAGAAAGCACAAGAAGAGACAGCTACAAGATACACTTAATCTTGTCATAAAGAAGAGGAGGGAATATGAAGACAAAATGCGGGAAAAGGGTGAGACCCCAGTTATGTTCAGTCATTTGGGGCCTCCTCGAAGGAGAACAACTGCAGAAGAAGAAGAGAGGGTTAAGCACCCGAAGCCTGAGGACTCTGTTTATTATCATCCTACATTAAACCCTACAGGGGCTCCACCACCAGGGAAACCTCCTATGTTTAAATCATCTATAGGACCCAGAATTCCTTTGTCTGGTGCTGCATCATCCTCGGCAACAGATTTGGAGAATGATGTATTAACTGTACCACCACCTCCCCCGCCGCCACCACTGCCTGATGGTAGCAGTGCGAGTTCAGCAGATGGTGCCGTTTTATCTGCATCTTTGCCATTGCCCCCTCCCCCTCCCATGCCTCCAAAGCCTGCTACTGCTGTGCCTACATCATTACCACCACCTCCTTTGCCTCCTCCACCTCCTGGTCCCCCACCTAAAGAACAAGTTGCAAATCGCACTCTTCCCCCTCCACCCCCGCCCCTACAACAGTCTCAACCTCCTCCACCTGGTACCAGTGGAGGTGAAGGGAGAAATCAGTCTGCATTTGCATTGATAGATGATTCACCTTCCAAGGAGCCTGGCCAGGTGCAGCTTCCTCCACCTCCTCCACCTAGTCAGGTGCCACCCAAGGCTGGTGCTATCCAGTCTGATGGTGCTGTGCTTTCTACTGAGAATAAGAATTCACTGTCAAGCCAGGAGATCCCAAAAATGGTTGCCGGGCATCCTCCTCCAAGGCAACAACCCCCTGTTCCAGGACCCACCTTAATCCCAAGTTTACAGCCTGATGTATTACTCCCTGGAATATCTCGTTTCCCTCCACCCCCGCCACCACCCGATATGAGACCTTCTTTGTCCGTCACAGGGCTACATGCTCAGGCACCACCTCCTGGAATGATGGTCCCCCTAATGCCAAGGCCACCATATGGTCCTCCACCTGGTCCTCCTCCAATGATGAGACCTCCACTTCCTCCTGGTCCTCCTCCAAACTTCCAGGAAGAGGATCATATAGCAACTAGGCCACCTCCTCCTCCTCCGAAACCATCATATGTTAAATCTGCTGCTTCTACTGTTGTTAAAAGGCCATTAGCTCAACACACTCCAGAACTAACAGCCATGGTTCCTGCATCTGTGCGAGTGAGAAGAGAAGCGGCAATGTCTAAAACAAAGCCAAAACCGGCAGTGTCAACCTCTAGGGCAGTCTCTGGTACATCTGGACCAACTATTGTGAAATCAGAGTCGGTGAGCTTGTCATCAGCTCCAAAAACACAGAGCATTGATGACTCATATACGGCTTTCTTAGAAGACATGAAAGCCCTTGGTGCACTTGATGGTTGA	1617	0.4966	MKTTKGGKVMNPTDAYRKEIRKKELKRNKKERKKVREVGILKKDPDQLKKQIENLEMMKADGALDKARKHKKRQLQDTLNLVIKKRREYEDKMREKGETPVMFSHLGPPRRRTTAEEEERVKHPKPEDSVYYHPTLNPTGAPPPGKPPMFKSSIGPRIPLSGAASSSATDLENDVLTVPPPPPPPPLPDGSSASSADGAVLSASLPLPPPPPMPPKPATAVPTSLPPPPLPPPPPGPPPKEQVANRTLPPPPPPLQQSQPPPPGTSGGEGRNQSAFALIDDSPSKEPGQVQLPPPPPPSQVPPKAGAIQSDGAVLSTENKNSLSSQEIPKMVAGHPPPRQQPPVPGPTLIPSLQPDVLLPGISRFPPPPPPPDMRPSLSVTGLHAQAPPPGMMVPLMPRPPYGPPPGPPPMMRPPLPPGPPPNFQEEDHIATRPPPPPPKPSYVKSAASTVVKRPLAQHTPELTAMVPASVRVRREAAMSKTKPKPAVSTSRAVSGTSGPTIVKSESVSLSSAPKTQSIDDSYTAFLEDMKALGALDG	538

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Gma05g00301	538	Coils	Coil	13	33	-	-
	Gma05g00301	538	Pfam	mRNA biogenesis factor	126	181	-	-
	Gma05g00301	538	MobiDBLite	consensus disorder prediction	335	350	-	-
	Gma05g00301	538	MobiDBLite	consensus disorder prediction	204	261	-	-
	Gma05g00301	538	Coils	Coil	72	92	-	-
	Gma05g00301	538	MobiDBLite	consensus disorder prediction	176	190	-	-
	Gma05g00301	538	MobiDBLite	consensus disorder prediction	288	303	-	-
	Gma05g00301	538	Pfam	WW domain binding protein 11	7	83	IPR019007	GO:0006396
	Gma05g00301	538	PANTHER	WW DOMAIN-BINDING PROTEIN 11	2	537	IPR019007	GO:0006396
	Gma05g00301	538	MobiDBLite	consensus disorder prediction	159	173	-	-
	Gma05g00301	538	MobiDBLite	consensus disorder prediction	361	376	-	-
	Gma05g00301	538	MobiDBLite	consensus disorder prediction	110	129	-	-
	Gma05g00301	538	MobiDBLite	consensus disorder prediction	475	518	-	-
	Gma05g00301	538	MobiDBLite	consensus disorder prediction	91	460	-	-
	Gma05g00301	538	MobiDBLite	consensus disorder prediction	484	518	-	-
	Gma05g00301	538	PANTHER	WW DOMAIN-BINDING PROTEIN 11	2	537	-	-
	Gma05g00301	538	MobiDBLite	consensus disorder prediction	312	328	-	-
	Gma05g00301	538	MobiDBLite	consensus disorder prediction	391	424	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Gma05g00301	Gma-Chr5	2755231	2761310	Wgd

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Gma05g00301	-		-	gmx:100792892	786.178

Event-related genes

Select	Gene_1	Chr_1	Start_1	End_1	Gene_2	Chr_2	Start_2	End_2	Event_name
	Gma05g00301	05	2755231	2761310	Gma05g00301	05	2755231	2761310	ECH
	Gma17g00899	17	7646878	7653296	Gma05g00301	05	2755231	2761310	GST