Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma05g00296 ATGATGACAATGGAGAAAGAAAGTATGGAGAACAATGAGAAACATGTGACAGAGAATGATCCTAAGATTAACTACAGAGGATGGAAGGCCATGCCTTTTATCATAGGAAATGAAACTTTTGAGAAATTGGGAGCCATTGGCACCTTGGCCAATCTTTTAGTCTATCTCACTACTGTATTCAACCTGAAGAACATCACAGCCACAAATATAATCAACATCTTCAACGGCAGCACCAACTTTGCTACCTTCATAGGTGCCTTCTTATCTGACACCTACTTTGGTCGCTACAAGACAATAGGATTCTGCACATTCACTTCATTTCTGGGATTGCTACTGATACAACTTACAGCAGTATTTAAAAATCTGCATCCACCTCACTGTGGAAAGGAGATGAAAACATGCATAGGACCAACTGCAGGGCAAATGGCTTTTCTAGTGTCTGGATTTGGTTTGCTGCTGATTGGTGCTGCAGGAGTCAGACCATGTAACTTGGCATTTGGAGCTGATCAGTTCAATCCCAATACAGATTCAGGAAAAAAAGGAATCAACAGTTTCTTCAATTGGTACTTTTTTACCTTCACTTTTGCCCAGATGGTGTCTTTGACACTGATTGTTTATGTACAGTCAAATGTGAGCTGGGCAATAGGGTTGGGAATTCCTGCTGCTTTGATGCTCATATCTTGTTTGGTGTATTTCATGGGGTCCAAAATCTATGTCAAAGTTAAACCAAGTGGTAGTCCCATTACTGGTATTGTGCAAGTTTTGGTGGTTGCAGTAAAAAAAAGGAGTCTAAAATTACCTGCAGAGCATCCAATGCTTTCCCTCTTCAACTATGTGCCGCCCATGAGTGTTAACTCCAAGCTTCCTTACACGTTTCAGTTCAGGTTATTGGACAAAGCAGCCATTGTGACCCCAAAAGATAAAATAAAACCAGATGGATCTGCAGCAGATCCATGGAATCTTTGCAGCATACAGCAAGTGGAGGAGGCAAAATGTGTGGTGAGAGTATTACCTATATGGTTTGCAGCCATTGTGTACCACTTAGTCATTGTCCAAATGCACACTCTCCTAGTGTTTCAAGCCCTTCAATCCGATAGGCGTCTCAGAAGAAGCAGCAACTTCAAGATCCCTGGTGCATCCTTTAATGTCTTCTTGATGTTGAGCATGACCTTGTGGCTGCCAATCTATGACAGAATAGTGGTCCCTTTTCTCCATCGAATCACCGGAAAAGAGGGTGGCATCACACTCCTTCAGAGGATGGGAATTGGCATTTTTCTCTCTGCATTGTGCATGCTAGTAGCTGGTGTAGTTGAAGAGCATAGAAGAAGTTTGGCTCTGACCAACCCTATAGGAGTGCAACCAAGAAAAGGTGCTATTTCATCAATGTCAGGTCTATGGTTAATTCCTCAATTAGCACTTGCCGGTCTATCTGAATCTTTCACTGCTGTTGGACAAGTTGAATTTTACTACAAGCAATTCCCTGAGAACATGAGAAGCATTGCAGGGTCACTATTCTACTGTGGCATGGCAGGGTCAAGTTATTTGAGCACTCTTCTGATTTCAATTGTTCACAATACTAGTGAGAAATCTGCAACTGGGAACTGGTTACCAGAAGATCTTAACAAGGGGAGATTGGATTTCTTTTATTACATGATTGCTGCTCTAGAAATCATGAATTTGGGGTACTTTCTATTGTGTTCAAAATGGTACAAGTATAAGGAAACTGGCAGCAGTAGTAACCTTGAACTCAACCAAGTACCCAAACAATCTGAAACATCCACTATTGGTGTTTAA 1794 0.4153 MMTMEKESMENNEKHVTENDPKINYRGWKAMPFIIGNETFEKLGAIGTLANLLVYLTTVFNLKNITATNIINIFNGSTNFATFIGAFLSDTYFGRYKTIGFCTFTSFLGLLLIQLTAVFKNLHPPHCGKEMKTCIGPTAGQMAFLVSGFGLLLIGAAGVRPCNLAFGADQFNPNTDSGKKGINSFFNWYFFTFTFAQMVSLTLIVYVQSNVSWAIGLGIPAALMLISCLVYFMGSKIYVKVKPSGSPITGIVQVLVVAVKKRSLKLPAEHPMLSLFNYVPPMSVNSKLPYTFQFRLLDKAAIVTPKDKIKPDGSAADPWNLCSIQQVEEAKCVVRVLPIWFAAIVYHLVIVQMHTLLVFQALQSDRRLRRSSNFKIPGASFNVFLMLSMTLWLPIYDRIVVPFLHRITGKEGGITLLQRMGIGIFLSALCMLVAGVVEEHRRSLALTNPIGVQPRKGAISSMSGLWLIPQLALAGLSESFTAVGQVEFYYKQFPENMRSIAGSLFYCGMAGSSYLSTLLISIVHNTSEKSATGNWLPEDLNKGRLDFFYYMIAALEIMNLGYFLLCSKWYKYKETGSSSNLELNQVPKQSETSTIGV 597
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma05g00296 597 Pfam POT family 96 535 IPR000109 GO:0016020|GO:0022857|GO:0055085
Gma05g00296 597 PANTHER PEPTIDE/NITRATE TRANSPORTER 11 581 - -
Gma05g00296 597 SUPERFAMILY MFS general substrate transporter 18 572 IPR036259 -
Gma05g00296 597 CDD MFS_NPF1_2 31 570 - -
Gma05g00296 597 PANTHER OLIGOPEPTIDE TRANSPORTER-RELATED 11 581 IPR000109 GO:0016020|GO:0022857|GO:0055085
Gma05g00296 597 Gene3D MFS general substrate transporter like domains 2 578 IPR036259 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma05g00296 Gma-Chr5 2675580 2678451 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma05g00296 8 591 Organic Solute Cotransporters AT5G62680 61.735 0.0 763
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma05g00296 - - gmx:100814170 1181.39
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma05g00296 05 2675580 2678451 Gma05g00296 05 2675580 2678451 ECH