Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma05g00265 ATGGGTTTCACTGCTGAGCAGGTGCAGCAGCCTGAAACCCACGAAGCAGATCCACGCCCAAATCTGCAAAACCGGTCTTCACAGACCCTTTTGTCTTCGGCAAGCTCCTTCTCCCCTGCGCTATCACCATCACCGACGCTCTCCGTCTCTTCCACCACTTCCCCAACCCCCACACCTTCATGCACAACACCCTCATTCGTGCTCTCTCCCTCTCCCAAACCCCTCTTTCCTCCCTCCACCCCTTCATCCAACTCCGCCGTCAACCCACCCTCTCCCCCGACAGTTTCATCTTCGCCTTCGCCCTCAAAGGCGTCGCCAACTCCCGCCACCTCAGACCCGGCATTCAGCTGCATTCCCAAGCCTTCCGCCACGGCTTCGACGCCCACATCTTTGTCGGGACAACgcgCGCGGGACGTGACCTCGTGGAATGCGATGCTTGCTGGTTATGCCAAAGCAGGCGAGCTTGGATTGGCAAGGAGAGTTTTTTCTGAAATGCCTCTGAGAGATGAGGCTGGGGCGTTTGAGTTTGGGAAGATTTTACATGGGTTTGTGGAGAAAGCTGGGTTTCTTTATGTTGGTTCTGTAAATAATGCTCTCATAGATACCATAGATACCTACTCCAAGTGTGGGAATGTAGCTATGGCTAGcattcatggtaatattgaaatggcagagcttgtgaaagcaaggcttgctgaaatggatccagaaaactctggtgatcatGTCATTTATGGTTTTGTGGCTGGTGAAAAGCCTAATGAGGTTACGGAAGAGGCTCGTGATAAACAGAGGGAAATAATGTTGAGACTCAGAACAGAAGCAGGTTATGCACCACAGCTAAGGAGTGTCCTGCATGATATTGAAGAGGAAGAAAAAGAAGATTCAGTTTCTAAGCACAGTGAGAAGCTTGCTGCTGCTTTTGGAATAGCAAAACTTCCCAAGGGAAGGATTTTAAGAATTGTGAAGAACCTGAGGGCCTCCCAAATGCCACACCACTTAGATTTTCCAGCCACTTCAATTCTTCATGGTGATGATGATCACCATAGTGATCCCTTGCTCCTTGTTCCAGTGCACCCGCCTCTAAACCAAGGTTTGATTGAATCTATGGACACCCACATGCCATTAGAATTGGAGTTCAGTGTTAGCATAGCTGTGACTGTGATTTTACCAACCCCGACCAAAAATCTCACCAAGTTCGCGCTTTCACCACTATCCCTTCTAATGGCTCTCTCCGCAACATTTATGCCTCCTTCATCCCCAAAATTGAACCTTTATTCCAAAATTCGTAGACCCTTTTACCCTCACTCTGTCAGACTCCTTAAGCCCGTAAAGATTTGGGCTTCAACTACTCTGGATTATTCCAACGTCTCTACCAACGACAAATCCTCCCCTTTGAAGACTAGCAATTGGCAATGGAAGTTCAAGGACAATTTTATAAACATTTATTACGAGGAGCACGTAAAGGAGAGTCCGGAGCCTCCCCAAAATATCTTGATGATGCCAACCATTTCTGATGTTAGCATGGTCGAGGAATGGAGACTAGTGGCTGGAGACATTGTTCAACGTAATGGCAACACCAATTGGCGGGCAACTATTGTTGATTGGCCTGGCCTGGGTTATTCTGATCGGCCAAAGATGGATTACAACGCTGATGTCTTGGAAAAATTTCTGGTTGATTTCATCAATTCACCCAATGGACCAATGAAACAACCAGAAAATGATTTGATAATTTTTGGAGGAGGACACGCTGCAACTATAGTAGCCCGTGCTGCAAAAAAGGGTCTGGTGAAGCCCAAAGCTATAGCTGCTGTTGCACCAACTTGGGCTGGTCCACTCCCTATTGTGTTTGGTCGAGACTCCAATATGGAAACAAGGTATGGTCTTCTAAGAGGCACGTTAAAGGCCCCTGCTGTTGGCTGGATGATGTATAACATGCTTGTGAGCAACGAGAACGCAATCCAGTCACAGTACAAATCCCATGTATATGCCAACCCTGACAATGTGACTCCAGGAATTGTGGAAAGCAGATATGCATTGACCAAAAGAAAGGGAGCACGTTACTTGCCTGCCGCGTTCCTGACTGGTCAATTAGATCCTGTTACATCTCGCGAGGAGTTCCTTGAGCTCTTCGCGGCTTTGGAGGGAAAGACACCTGTGCTGGTTGTATCAACCAAAGGATCTCCCAAGAGGTCTAAGGCTGAGATGGAAGCTCTCAAGGGAGCTAAAGGGGTTAGCAAGTTTGTGGAAGTGCCAGGTGCTCTTCTTCCCCAAGAGGAGTATCCTGCTTTGGTGGCAGAAGAGCTTTATCAGTTCTTGCAAGAATATTTTGGCACTGTTGCTTAG 2346 0.4625 MGFTAEQVQQPETHEADPRPNLQNRSSQTLLSSASSFSPALSPSPTLSVSSTTSPTPTPSCTTPSFVLSPSPKPLFPPSTPSSNSAVNPPSPPTVSSSPSPSKASPTPATSDPAFSCIPKPSATASTPTSLSGQRARDVTSWNAMLAGYAKAGELGLARRVFSEMPLRDEAGAFEFGKILHGFVEKAGFLYVGSVNNALIDTIDTYSKCGNVAMASIHGNIEMAELVKARLAEMDPENSGDHVIYGFVAGEKPNEVTEEARDKQREIMLRLRTEAGYAPQLRSVLHDIEEEEKEDSVSKHSEKLAAAFGIAKLPKGRILRIVKNLRASQMPHHLDFPATSILHGDDDHHSDPLLLVPVHPPLNQGLIESMDTHMPLELEFSVSIAVTVILPTPTKNLTKFALSPLSLLMALSATFMPPSSPKLNLYSKIRRPFYPHSVRLLKPVKIWASTTLDYSNVSTNDKSSPLKTSNWQWKFKDNFINIYYEEHVKESPEPPQNILMMPTISDVSMVEEWRLVAGDIVQRNGNTNWRATIVDWPGLGYSDRPKMDYNADVLEKFLVDFINSPNGPMKQPENDLIIFGGGHAATIVARAAKKGLVKPKAIAAVAPTWAGPLPIVFGRDSNMETRYGLLRGTLKAPAVGWMMYNMLVSNENAIQSQYKSHVYANPDNVTPGIVESRYALTKRKGARYLPAAFLTGQLDPVTSREEFLELFAALEGKTPVLVVSTKGSPKRSKAEMEALKGAKGVSKFVEVPGALLPQEEYPALVAEELYQFLQEYFGTVA 781
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma05g00265 781 PANTHER ALPHA/BETA-HYDROLASES SUPERFAMILY PROTEIN 409 777 - -
Gma05g00265 781 SUPERFAMILY alpha/beta-Hydrolases 477 777 IPR029058 -
Gma05g00265 781 Pfam PPR repeat 141 166 IPR002885 -
Gma05g00265 781 Gene3D alpha/beta hydrolase 475 776 IPR029058 -
Gma05g00265 781 Gene3D Tetratricopeptide repeat domain 131 234 IPR011990 GO:0005515
Gma05g00265 781 TIGRFAM PPR: pentatricopeptide repeat domain 141 166 IPR002885 -
Gma05g00265 781 MobiDBLite consensus disorder prediction 120 135 - -
Gma05g00265 781 Pfam DYW family of nucleic acid deaminases 276 333 IPR032867 GO:0008270
Gma05g00265 781 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 138 168 IPR002885 -
Gma05g00265 781 MobiDBLite consensus disorder prediction 1 69 - -
Gma05g00265 781 MobiDBLite consensus disorder prediction 70 99 - -
Gma05g00265 781 MobiDBLite consensus disorder prediction 1 135 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma05g00265 Gma-Chr5 2395868 2405354 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma05g00265 274 326 Acyl Lipid Metabolism Gene Families AT1G47580 54.717 1.03e-12 67.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma05g00265 - - gmx:100789725 751.51
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma05g00265 05 2395868 2405354 Gma05g00265 05 2395868 2405354 ECH
Gma17g00939 17 8013624 8018198 Gma05g00265 05 2395868 2405354 GST