Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma05g00237 ATGAGTTCGTCCTCTCCACAACGTTCTCGCGGCGACGGCGAGAAAAGGCCCAGATTTTTCGACTCAAACGCGAAGGCCATCTGTTGGTCTAAAGCTGATACTGTCCCCGGCCGTCACCCTGAGAGGTGGCGCAAAGACGCCGCCGGTAACGTTGTCTGCAAACGTTTCTTCAACTGCATCGGCTGCCTCTGCTACGAGTACGATCACATCATTCCCTTTTCCAAAGGTGGTGAGTCCACTGCGGATAATTGCCAAATACTTCAATCAAGAGTTAACAGACTCAAATCGGACAAATATAACATTGATTCGGATCAATTGAAAGACTACTCCTGTGAGGTTAATTTTACTGATAAGGAACTTGATATTATTGAGATGGCTGTTTATGGCGATGTGATGCGGCCAGGAAACCAGTGTCGTTGCAGAACTATTGCTGAAAAGCTTGGCAAATTTAAACCAAAGGATGACACAGATGCATGTAAGTTGCCATAG 489 0.4642 MSSSSPQRSRGDGEKRPRFFDSNAKAICWSKADTVPGRHPERWRKDAAGNVVCKRFFNCIGCLCYEYDHIIPFSKGGESTADNCQILQSRVNRLKSDKYNIDSDQLKDYSCEVNFTDKELDIIEMAVYGDVMRPGNQCRCRTIAEKLGKFKPKDDTDACKLP 162
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma05g00237 162 PANTHER HNH ENDONUCLEASE 12 161 - -
Gma05g00237 162 SMART HNH_5 47 93 IPR003615 -
Gma05g00237 162 Pfam HNH endonuclease 53 97 IPR002711 GO:0003676|GO:0004519
Gma05g00237 162 CDD HNHc 54 96 IPR003615 -
Gma05g00237 162 Gene3D - 23 118 - -
Gma05g00237 162 PANTHER F6A14.21 PROTEIN 12 161 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma05g00237 Gma-Chr5 2153073 2155128 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma05g00237 - - gmx:100527904 345.125
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma05g00237 05 2153073 2155128 Gma05g00237 05 2153073 2155128 ECH