Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma05g00208 ATGGAACGTGAAAACGACAACAGCGCCAAAAGCAGTGTCAACGGTCAGCGCCGCGTGGGTTTACTCTACGACGAGAGGATGTGCAAGCACCACACACCAGACGACGAGGACCATCCCGAGACCCCCAATCGCATCAGAGCTATTTGGAACAAACTCCAAAGCACCGGCGTTCCCCAACGatgcgtgattttggaggccaaagaagctgaggacaaacatctactgttagtgcattctgaaaatcatgttaatctgattaagaacatcagctcaaagcagttcaattcgcggaggcataagattgcctcaaaattggattccatatattttaatgaaggttcatcggaagctgcgtaccttgctgctggctctgcagtagaggttgttgaaagagtggcaagcagggaattggattctgctgttgccattgttaggcctccaggtcatcatgcagaacaaaatgaagctatgggattctgtctgttcaacaatgtggcagttgctgcaagatatctcttagatgaaagaccagaattaggtgtgaagaaaatattaattgttgattgggatgtccatcatggaaatggtactcagaaaatgttctggaatgattctcgagttttattcttttccgttcacaggcatgagtttgggagtttttatccagctaatgatgatggattttataccatgattggagaaggagcaggtgctggatataatataaatgtcccctgggagaatgggcgatgtggtgatgcagattactttgcagtgtgggaccacatcttgcttcctgttgctaaagaatttaatccagacataattatagtttctgctggatttgatgcagctgttggtgaccctctgggaggatgccgtgtcacaccatttggttattctgttctgttagagaagttgatgaattttgctgaaggtaggattgtactgattttagaaggaggatataaccttgattccatcgcaaaatcaatgcatgcctgcttggaagtttTGCTAGAGGACAAGCCTGTTATTGGATCCTCAGAGGCCTATCCATTTGAATCTACGTGGCGTGTGATTAAAGCGGTTCTCCTGGAGTTAAGTCCCTTTTGGCCTACACTTGCATGTGAATTACCGCAAAAGTTAATCTCACAAATGGCACCACCTCCGCATACTCTTGTCTCAAGCTCTGACTCTGAGGCTGAGGATGATAAGGGTGCACCAAGTTCAGAAAATTTTGTTGAACTTCTTGAGGATGTCATAAAACCACTTTCCAAACTGAAAGTTGATGCTGATGAAGATACTGATGTTTCTAGTACTTGGCGATCTGAATTGTCAAATGTTTATATATGGTATGCCTCATATGGATCAAATATGTGGAAGGCAAGATTAAATTGCTACCTAGCAGGTGGACAGGTGGAAGGTATGCAGAAGGGGTGTTCTGGTTCAGTGAATAGAACTCTGCCAAAAGAGATCCTGTGGAAGACTTTCCCTTGTCATATATTTTTTGGTCGTGATTCATCACATTCATGGGGTATGGGAGGCGTTGCATTTCTTAATCCTGAGAAAAGTTTTCAGCACAACACCTATATGTGCCTGTACAAAATTTCGCTAGAGCAGTTCAATGATATTTTGTTTCAGGAAAATGGTTTAAGCCTTGATGCGGGCTCTCCTTTATTTGATATAACTACTCTGAATGCTATCTCTTACAAGGAGTTCCACTCTCTGGAGGTTGTCAAGGGTGCTTGGTATGGCAATGTTGTCTACTTAGGAAAGGAGCTGGATATTCCAGTAATTACCATGACGTGTTCTCTTCTTGATATTGAACGTTTCAAATCTGGGAAGCTACCATTGCGTGCCCCTAATAAAGCGTATGCAAACACCTTAATAAAAGGGTTGGTAGATGGAGAACAGCTTTCAGAGGTGGAAGCCATCGCTTACATAGAAGGTGCTGCTAAATCATTGTAG 1971 0.2537 MERENDNSAKSSVNGQRRVGLLYDERMCKHHTPDDEDHPETPNRIRAIWNKLQSTGVPQRCVILEAKEAEDKHLLLVHSENHVNLIKNISSKQFNSRRHKIASKLDSIYFNEGSSEAAYLAAGSAVEVVERVASRELDSAVAIVRPPGHHAEQNEAMGFCLFNNVAVAARYLLDERPELGVKKILIVDWDVHHGNGTQKMFWNDSRVLFFSVHRHEFGSFYPANDDGFYTMIGEGAGAGYNINVPWENGRCGDADYFAVWDHILLPVAKEFNPDIIIVSAGFDAAVGDPLGGCRVTPFGYSVLLEKLMNFAEGRIVLILEGGYNLDSIAKSMHACLEVLLEDKPVIGSSEAYPFESTWRVIKAVLLELSPFWPTLACELPQKLISQMAPPPHTLVSSSDSEAEDDKGAPSSENFVELLEDVIKPLSKLKVDADEDTDVSSTWRSELSNVYIWYASYGSNMWKARLNCYLAGGQVEGMQKGCSGSVNRTLPKEILWKTFPCHIFFGRDSSHSWGMGGVAFLNPEKSFQHNTYMCLYKISLEQFNDILFQENGLSLDAGSPLFDITTLNAISYKEFHSLEVVKGAWYGNVVYLGKELDIPVITMTCSLLDIERFKSGKLPLRAPNKAYANTLIKGLVDGEQLSEVEAIAYIEGAAKSL 656
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma05g00208 656 PRINTS Histone deacetylase superfamily signature 146 169 IPR000286 -
Gma05g00208 656 PRINTS Histone deacetylase superfamily signature 273 283 IPR000286 -
Gma05g00208 656 Gene3D - 439 654 - -
Gma05g00208 656 MobiDBLite consensus disorder prediction 390 409 - -
Gma05g00208 656 PANTHER BNAA09G05590D PROTEIN 11 611 - -
Gma05g00208 656 Pfam Histone deacetylase domain 38 338 IPR023801 -
Gma05g00208 656 PANTHER HISTONE DEACETYLASE 11 611 - -
Gma05g00208 656 Gene3D Histone deacetylase domain 11 389 IPR037138 -
Gma05g00208 656 SUPERFAMILY Arginase/deacetylase 17 346 IPR023696 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma05g00208 Gma-Chr5 1929374 1935868 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma05g00208 K11406 - gmx:100788831 1330.08
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma05g00208 05 1929374 1935868 Gma05g00208 05 1929374 1935868 ECH
Gma17g00736 17 6221103 6227539 Gma05g00208 05 1929374 1935868 GST
Gma05g00208 05 1929374 1935868 Gma04g01640 04 44622057 44623942 PCT