Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma05g00188 ATGCAGGGTTTAATTCGCAAACTGGTGGCACAGGTACAGGCACAGCATCCCCTTCGCAACACCAACTCTCACCACCGTATCTTCAACACTCACAGCGCCTTCTCCTCTGTTCCCAAACCTTCGCAACCCCAACTGCATCAAGTGAACCACATTCACTCTCCCTTCCTCACTCACCCACTTCATCATTTTCACTCATGCCGCTCCTTTTCCACCAAATTTCGCGCCTTTCTCTCCCAACCAATGATCTCGCGTCACTTCGCCTTCAATCCTCTCCTCAGGGTCTCTGCCAGAAGCCTCCAAATCGGTTGCAGGCCCAGTCTTCATTATTTTATTCGACACAACTTCAATTTCAGCCATAATCACGATTTTTCTCGGCGTTCTTGGAGATCATGGCTCCGTGGGCTAACAGCTAATGACATGGTTTTGGGCTTGATTATAGCTAATGTTGCTATTTTTTTATTGTGGAGGATAGCAGATCAAAATTTTATGATAAAGAACTTTACTATCTCTTTGGACAATTTTAAGAGTGGACGTTTGCACACTTTGATTACCAATGCATTCAGTCATGTAGATACCTGGCATATAGTTTCCAACATGATTGGACTCTACTTCTTTGGAATGAATATTGGAAGAAATTTTGGACCTGAATTTCTGCTGAAGTTGTATCTTGCTGGGGCAGTTGGTGGCTCTGTTTTTTACTTGATCCATCAGGCCTATAAAGCACAAACATCAAAGGACTGGAGAACTATGATTGTTTCAAAGGAATTAGCATTGGGGGCAAGTGGAGCTGTAAATGCAGTTATGCTACTTGACATATTTCTCTTTCCAAAAGCAACCCTTTACCTTGACTTTTTTATACCAGTTCCCGCGGTCTTGCTGGGTATCTTTTTGATTGGGAAAGATATGCTAAGGATACTTGAGGGAAACAGTCAAATATCAGGATCTGCACATTTGGGAGGTGCTGCTGTTGCAGCCATAGCTTGGGCAGGGGTTCGGAAAGGAAGATTCTAA 1011 0.4362 MQGLIRKLVAQVQAQHPLRNTNSHHRIFNTHSAFSSVPKPSQPQLHQVNHIHSPFLTHPLHHFHSCRSFSTKFRAFLSQPMISRHFAFNPLLRVSARSLQIGCRPSLHYFIRHNFNFSHNHDFSRRSWRSWLRGLTANDMVLGLIIANVAIFLLWRIADQNFMIKNFTISLDNFKSGRLHTLITNAFSHVDTWHIVSNMIGLYFFGMNIGRNFGPEFLLKLYLAGAVGGSVFYLIHQAYKAQTSKDWRTMIVSKELALGASGAVNAVMLLDIFLFPKATLYLDFFIPVPAVLLGIFLIGKDMLRILEGNSQISGSAHLGGAAVAAIAWAGVRKGRF 336
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma05g00188 336 PANTHER RHOMBOID-LIKE PROTEIN 12, MITOCHONDRIAL 19 329 - -
Gma05g00188 336 Pfam Rhomboid family 175 330 IPR022764 GO:0004252|GO:0016021
Gma05g00188 336 PANTHER RHOMBOID PROTEASE 19 329 - -
Gma05g00188 336 SUPERFAMILY Rhomboid-like 140 333 IPR035952 -
Gma05g00188 336 Gene3D - 137 329 IPR035952 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma05g00188 Gma-Chr5 1771618 1778796 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma05g00188 - - gmx:100819148 654.055
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma05g00188 05 1771618 1778796 Gma05g00188 05 1771618 1778796 ECH
Gma17g00756 17 6356281 6360054 Gma05g00188 05 1771618 1778796 GST