Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma05g00170 ATGTGCAGGGCGGAGTGGGAAGGTTTTATGGGTCTGAAGAAGTGGGAAAGTAAGGTTCCGAAGGTGGGAATGGGAATGGGTGTGTTAGGTTCGGGTTCGGGTTCGGGTTCGTCGCGGTCGAGAATGAAGATGTGGATGATACGGGCGACCACATCGGTGTTACTGTGGACCTGCATCGTTCAGTTAACGGCGTTGGGTGACATGTGGGGGCCGAGAGTTTTGAAAGGTTGGCCTTCTTGTTTCACTCACGAGTCTGCCGTTAGAGCAATGGATGTCGAGCTACCGTCACCGCGTCCTCCTCTTCTCCCTCCAAAGAGAGTTTATAAAAACAATGGTTATCTTATGGTCTCGTGCAATGGAGGACTCAACCAGATGAGAGCTGCGATATGTGACATGGTGGCTATTGCTCGATATTTAAATGTCACGCTTATAGTTCCTGAACTGGATAAAACATCCTTTTGGGCTGATCCCAGTGACTTccaagacatatttgatgtggatcattttatcacttccttgagagatgaagtgcggaTACTGAAAGAGTTGCCTCCCAGACTCAAGCTGAAAGTGGAGCGCGGGTTTCTTTACACCATGCCGCCTATTAGTTGGTCTGATATATCTTACTATAAGGATCAGATTCTACCCTTGATACAAAAGTACAAAGTTGTTCATTTAAATAGAACTGATGCTCGGTTGGCCAATAATGGTCAACCGCTGGAGATTCAGAAGCTGCGTTGCCGAGTTAATTTTAGTGGTCTGAGATTTACTTCTCAGATAGAGGAGTTGGGCAGAAAGGTGATCAGGCTTCTTAGGCAAAAGGGGCCATTTCTGGTGCTCCATTTGAGGTATGAGATGGACATGTTGGCATTTTCTGGCTGTACTCAAGGTTGTAACAGTGATGAGGTGGACGAATTGACAAGAATGAGATATGCTTATCCTTGGTGGAAGGAAAAAATAATTAATTCTGATTTGAAAAGAAAAGATGGTTTATGCCCTCTAACACCTGAGGAGACTGCCCTTACGCTTAAGGCTCTTGACATTGATCAGAACATTCAAATCTACATTGCAGCTGGGGAAATATATGGAGGGGAAAGGAGAATGGCAAGTCTAGCGAAGGAGTACCCAAAATTGGTCAGGAAGGAAACGCTGTTGGAGCCATCCGACCTTCAGTTCTTCCAAAATCATTCATCCCAGATGGCAGCATTGGATTATCTTGTCTCATTAGAGAGTGATATTTTTGTTCCCACATATGATGGAAATATGGCCAAAGTGGTTGAGGGCCACCGCAGATATCTTGGGTTCAAGAAAACGATTTTGTTGAACAGAAAACTCCTAGTCGAATTGATAGATCAATACAATAATGGAGTGCTGAACTGGGATGAATTCTCTTCAGCAGTGAAGGAAGCCCATGCCAATCGCATGGGTAGCCAAACCAAGAGGTTTGTAATCCCTGACAAGCCAAAAGAAGAGGATTATTTCTATGCCAACCCACAGGAGTGTTTGGAACCATCAGCATATGAACTGTTGGCGTTGAGTAGAACGTGA 1548 0.4341 MCRAEWEGFMGLKKWESKVPKVGMGMGVLGSGSGSGSSRSRMKMWMIRATTSVLLWTCIVQLTALGDMWGPRVLKGWPSCFTHESAVRAMDVELPSPRPPLLPPKRVYKNNGYLMVSCNGGLNQMRAAICDMVAIARYLNVTLIVPELDKTSFWADPSDFQDIFDVDHFITSLRDEVRILKELPPRLKLKVERGFLYTMPPISWSDISYYKDQILPLIQKYKVVHLNRTDARLANNGQPLEIQKLRCRVNFSGLRFTSQIEELGRKVIRLLRQKGPFLVLHLRYEMDMLAFSGCTQGCNSDEVDELTRMRYAYPWWKEKIINSDLKRKDGLCPLTPEETALTLKALDIDQNIQIYIAAGEIYGGERRMASLAKEYPKLVRKETLLEPSDLQFFQNHSSQMAALDYLVSLESDIFVPTYDGNMAKVVEGHRRYLGFKKTILLNRKLLVELIDQYNNGVLNWDEFSSAVKEAHANRMGSQTKRFVIPDKPKEEDYFYANPQECLEPSAYELLALSRT 515
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma05g00170 515 PIRSF UCP009360 20 499 IPR024709 -
Gma05g00170 515 CDD O-FucT_plant 113 438 IPR024709 -
Gma05g00170 515 Pfam GDP-fucose protein O-fucosyltransferase 113 433 IPR019378 -
Gma05g00170 515 PANTHER GDP-FUCOSE O-FUCOSYLTRANSFERASE-LIKE PROTEIN 18 507 - -
Gma05g00170 515 PANTHER OS02G0726500 PROTEIN-RELATED 18 507 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma05g00170 Gma-Chr5 1608657 1611703 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma05g00170 109 502 Miscellaneous Gene Families AT2G37980 50.126 7.36e-133 398
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma05g00170 K23280 - gmx:100793244 1010.36
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma05g00170 05 1608657 1611703 Gma05g00170 05 1608657 1611703 ECH