Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Gma05g00143 | ATGAAGACACTAGTCATGGACACAACCTCATCAACCCCTCAAGACTCATCATCCTCCAAGAGGCACTTCCACTGGACGAACAAGGTTGGAAATGAAGACCCCCAACTCGCCACCTCAGAAACGATGTCAAAAATCATAGAAGAAGAAGACACAAACACAAAGGAAAAAGAACAAGAAGAAGATGACAAGGCTGTTCCACTTCCAGGCCCTGCCACAAAGAGAAAGATTCAGGCAGTGGCAATCTCAAGGCTCCGATCTGTTCTGACTGTGTTCAGCAAAAACCACCGTTCCAACCTCCCCTTCGGCCTCGGCTCCAGAGTCGTTGGCACCCTCTTCGGCTACCGCCGCGGCCACGTGCATTTCGCCTTCCAGAGGGACCCCACTTCGCAACCCGCCTTCCTCATCGAGCTCGCGACCCCAATCAGCGGACTTGTCCGCGAAATGGCGTCTGGGCTGGTGAGAATTGCTTTGGAGTGTGACAAGGACAAAGACTCAGAGGAGAAGAAGACGACGAAGAAGAACAAGACCCTGAGGCTGCTTCAGGAGTCCGTGTGGAGGACCTACTGCAACGGTAAAAAGTGCGGCTTTGCCACGAGAAGAGAATGTGGAGCCAAAGACTGGGACATACTGAAGGCAGTGGAGCCAATTTCTATGGGTGCAGGTGTTTTGCCTAACAGTGATGGGTCTGATGGTGAAGTCATGTACATGAGGGCTAGGTTTGAGAGAATTGTTGGTTCCAGAGACTCTGAAGCTTTCTACATGATGAATCCTGACAGCAATGGAGCACCTGAGCTCAGTATTTACTTGCTTAGAGTCTAG | 819 | 0.5104 | MKTLVMDTTSSTPQDSSSSKRHFHWTNKVGNEDPQLATSETMSKIIEEEDTNTKEKEQEEDDKAVPLPGPATKRKIQAVAISRLRSVLTVFSKNHRSNLPFGLGSRVVGTLFGYRRGHVHFAFQRDPTSQPAFLIELATPISGLVREMASGLVRIALECDKDKDSEEKKTTKKNKTLRLLQESVWRTYCNGKKCGFATRRECGAKDWDILKAVEPISMGAGVLPNSDGSDGEVMYMRARFERIVGSRDSEAFYMMNPDSNGAPELSIYLLRV | 272 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Gma05g00143 | 272 | MobiDBLite | consensus disorder prediction | 1 | 20 | - | - | |
| Gma05g00143 | 272 | MobiDBLite | consensus disorder prediction | 43 | 68 | - | - | |
| Gma05g00143 | 272 | MobiDBLite | consensus disorder prediction | 1 | 69 | - | - | |
| Gma05g00143 | 272 | PANTHER | PROTEIN MIZU-KUSSEI 1 | 1 | 272 | IPR006460 | GO:0010274 | |
| Gma05g00143 | 272 | PANTHER | DUF617 FAMILY PROTEIN | 1 | 272 | - | - | |
| Gma05g00143 | 272 | Pfam | Protein of unknown function, DUF617 | 107 | 271 | IPR006460 | GO:0010274 | |
| Gma05g00143 | 272 | TIGRFAM | A_thal_3588: uncharacterized plant-specific domain TIGR01570 | 107 | 272 | IPR006460 | GO:0010274 |
Duplication type information
| Select | Gene | Chromosome | Start | End | Duplicated_type |
|---|---|---|---|---|---|
| Gma05g00143 | Gma-Chr5 | 1406627 | 1407764 | Wgd |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Gma05g00143 | - | - | gmx:100808788 | 513.072 |
Event-related genes
| Select | Gene_1 | Chr_1 | Start_1 | End_1 | Gene_2 | Chr_2 | Start_2 | End_2 | Event_name |
|---|---|---|---|---|---|---|---|---|---|
| Gma05g00143 | 05 | 1406627 | 1407764 | Gma17g01153 | 17 | 10034990 | 10036183 | ECH | |
| Gma05g00143 | 05 | 1406627 | 1407764 | Gma05g00143 | 05 | 1406627 | 1407764 | ECH | |
| Gma17g01153 | 17 | 10034990 | 10036183 | Gma05g00143 | 05 | 1406627 | 1407764 | GST |